Bioinformática aplicada a las ciencias ómicas
Genómica y transcriptomica de patógenos y parásitos
Microbiología Ambiental
Número de registros: 4
  • Activos
  • Vencidos
  • Local pathogen portal in mexico, Swiss Institute of Bioinformatics, 2025 - 2026
  • Bacterias marinas con potencial para degradar plásticos, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 1900
  • Reacreditación laboratorio nacional de apoyo tecnológico de las ciencias genómicas "lnatcg", CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 1900
  • genómica y transcriptómica del isópodo parásito cymothoa exigua, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2017 - 2019

Nivel D del PRIDE
Nivel II del SNII
  • Doctorado, Ciencias Bioquímicas, IBT-UNAM (2007) con especialidad en Bioinformática

  • Licenciatura, Investigación Biomédica Básica, IIB-UNAM (2001)

  • Doctorado
  • M. C. Rebeca Gonzalez Ortiz

    Transcriptómica comparativa de la respuesta farmacológica al compuesto az5363 en dos líneas celulares de adenocarcinoma ductal humano.

  • Maestría
  • Estancia Temporal
Total de publicaciones: 169
  • Tipo
  • Fecha
Open Access Artículo
4 - Calderon-Ezquerro,M.C., Brunner-Mendoza,C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C., Ponce de Leon,A., Ortega-Rosas,C.I. (2025). Genetic sequencing of the airborne fungal spectrum and air quality at a public hospital in Mexico City. PLOS Global Public Health, 5 (6), e0004784.
Open Access Artículo
5 - Martinez-Garcia,G., Estrada,K., Lira-Amaya,J.J., Santamaria-Epinosa,R.M., Lopez-Arellano,M.E., Sciutto-Conde,E.L., Rojas-Martinez,C., Alvarez-Martinez,J.A., Sanchez-Flores,A., Figueroa-Millan,J.V (2025). Comparative Analysis of Immune Response Genes Induced by a Virulent or Attenuated Strain of Babesia bigemina. International Journal of Molecular Sciences, 26 (2), 487.
Open Access Artículo
6 - Brunner-Mendoza,C., Calderon-Ezquerro,M.C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C. (2024). Diversity and Composition of the Airborne Fungal Community in Mexico City with a Metagenomic Approach. Microorganisms, 12 (12), 2632.
Open Access Artículo
7 - Calderon-Ezquerro,M.C., Ponce de Leon,A.A., Brunner-Mendoza,C., Guerrero-Guerra,C.C., Sanchez-Flores,A., Salinas-Peralta,I., Lopez-Jacome,L.E., Colin-Castro,C.A, Martinez-Zavaleta,M.G. (2024). Assessment of airborne bacteria from a public health institution in Mexico City. PLOS Global Public Health, 4 (11), e0003672.
Artículo
8 - Embarcadero-Jimenez,S., Araujo-Palomares,C.L., Moreno-Perlin,T., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,A., Calcaneo-Hernandez,G., Silva-Jimenez,H. (2024). Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14. Archives of Microbiology, 206 (7), 328.
Open Access Artículo
9 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2024). Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
12 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V. (2024). Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Open Access Artículo
13 - Singh,P., Vydyam,P., Fang,T., Estrada,K., Gonzalez,L.M., Grande,R., Kumar,M., Chakravarty,S., Berry,V., Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B. (2024). Insights Into the Evolution, Virulence and Speciation of Babesia MO1 and Babesia divergens Through Multiomics Analyses. Emerging Microbes and Infections, 13 (1), 2386136.
Open Access Artículo
14 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Boukadida,C., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M. (2023). Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico. Elife, 12, e82069.
Open Access Artículo
Open Access Artículo
16 - Geiger,O., Sanchez-Flores,A., Padilla-Gomez,J., Degli-Esposti M. (2023). Multiple approaches of cellular metabolism define the bacterial ancestry of mitochondria. Science Advances, 9 (32), eadh0066.
Open Access Artículo
17 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M. (2023). Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Articulo
18 - Murga-Garrido,S.M., Ulloa-Perez,E.J., Diaz-Benitez,C.E, Orbe-Orihuela,Y.C, Cornejo-Granados,F., Ochoa-Leyva,A, Sanchez-Flores,A, Cruz,M, Castaneda-Marquez,A.C, Plett-Torres,T, Burguete-Garcia,A.I., Lagunas-Martinez,A. (2023). Virulence Factors of the Gut Microbiome Are Associated with BMI and Metabolic Blood Parameters in Children with Obesity. Microbiology Spectrum, 11 (2), e0338222.
Artículo
19 - Nabor-Romero,O., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Silva-Valenzuela,M., Vega-Arreguin,J., Sanchez-Flores,A., Rojas-Martinez,R.I (2023). Transcriptional alterations induced by Nacobbus aberrans in interaction with chili pepper CM-334 and Phytophthora capsici. Physiological and Molecular Plant Pathology, 123, 101942.
Open Access Artículo
20 - Rojas-Vargas,J., Adaya,L., Lacerda,A.L., Pedrotti,M.-L., Sanchez-Flores,A., Pardo-Lopez,L. (2023). Draft genome sequences of six bacteria isolated from polylactic acid samples from the Mediterranean Sea. Microbiology Resource Announcements, 12 (11), e0079423.
Open Access Artículo
21 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B. (2023). Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845-859.
Open Access Artículo
22 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
24 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F (2023). Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Open Access Artículo
25 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P. (2022). The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Open Access Artículo
26 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F. (2022). Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Artículo
27 - Corona-Herrera,G.A., Navarrete-Ramirez,P., Sanchez-Flores,F.A., Jimenez-Jacinto,V., Martinez-Palacios,C.A., Palomera-Sanchez,Z., Volkoff,H., Martinez-Chavez,C.C. (2022). Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae). Journal of photochemistry and photobiology.B, Biology, 235, 112550.
Open Access Revisión
28 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C. (2022). The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
29 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2022). Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
31 - Murga-Garrido,S.M., Orbe-Orihuela,Y.C., Diaz-Benitez,C.E., Castaneda-Marquez,A.C., Cornejo-Granados,F., Ochoa-Leyva,A., Sanchez-Flores,A., Cruz,M., Burguete-Garcia,A.I., Lagunas-Martinez,A. (2022). Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity. Children, 9 (2), 148.
Open Access Artículo
32 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Vega-Arreguin,J., Ochoa-Martinez,D., Sanchez-Flores,A., Romo-Castillo,M. (2022). Transcriptomic Analysis of the CM-334/P. capsici/N. aberrans Pathosystem to Identify Components in Plant Resistance and Resistance-Breaking Responses. International Journal of Plant Biology, 13 (2), 151-162.
Artículo
33 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I (2022). Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Carta nacional
34 - Perelman,C., Fastlicht,A., Sanchez-Flores,A., Wegman-Ostrosky,T. (2022). Superspreading event of Covid-19 in adolescents: is there a difference between the vaccinated and the unvaccinated?. Salud Publica de Mexico, 64 (5, sept-oct), 446-447.
Open Access Artículo
Open Access Artículo
36 - Rojas-Vargas,J., Gonzalez-Sanchez,R., Sanchez-Flores,A., Licea-Navarro,A.F., Pardo-Lopez,L. (2022). Complete Genome Sequence of Halopseudomonas aestusnigri Strain GOM5, Isolated from Asphalt Marine Sediments of the Gulf of Mexico. Microbiology Resource Announcements, 11 (4), e0122221.
Open Access Artículo
37 - Sanchez-Correa,M.D.S., Isidra-Arellano,M.C., Pozas-Rodriguez,E.A., Reyero-Saavedra,M.D.R., Morales-Salazar,A., Del Castillo,S.M.L., Sanchez-Flores,A., Jimenez-Jacinto,V., Reyes,J.L., Formey,D., Valdes-Lopez,O. (2022). Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis. Frontiers in Plant Science, 13, 1034419.
Open Access Artículo
39 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F. (2022). Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
40 - Vazquez-Chacon,C.A., Rodriguez-Gaxiola,F.J., Sanchez-Flores,A., Montano,S., Bello-Rios,C., Fonseca-Coronado,S., Lopez-Carrera,C.F., Martinez-Guarneros,A., Parra-Unda,R., Garcia-Magallanes,N., Arambula-Meraz,E., Escobar-Gutierrez,A., Cruz-Rivera,M., Lopez-Duran,P.A. (2022). Intra-host genetic population diversity: Role in emergence and persistence of drug resistance among Mycobacterium tuberculosis complex minor variants. Infection, Genetics and Evolution, 101, 105288.
Open Access Artículo
41 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F. (2022). The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Open Access Artículo
42 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A. (2021). In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
Open Access Artículo
43 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A. (2021). Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
Open Access Artículo
44 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F. (2021). Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
Artículo
45 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C. (2021). Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, 105 (9).
Artículo
46 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M. (2021). Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
Open Access artículo
47 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D. (2021). Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
Artículo
48 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
Open Access Artículo
49 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2021). Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
Artículo
50 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S. (2021). Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Open Access Artículo
52 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S. (2020). Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
Artículo
54 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L. (2020). The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
55 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E (2020). Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
Artículo
59 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F. (2020). Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
Artículo
61 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F. (2019). Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
62 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
64 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S. (2019). De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
Artículo
65 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T. (2018). Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
Artículo
66 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G. (2018). Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
67 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A. (2018). Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
Artículo
69 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R. (2018). De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
Artículo
Open Access Artículo
72 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R. (2018). Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
Artículo
73 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M. (2018). Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
Artículo
74 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M. (2018). Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Artículo
75 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A. (2017). Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
Open Access Artículo
77 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P. (2017). Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
78 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A. (2017). Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Artículo
Artículo
81 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M. (2016). The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
82 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
Open Access Artículo
83 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R. (2016). Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
Open Access Artículo
84 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A. (2016). Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
85 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A. (2016). Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
86 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E. (2016). Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
Open Access Artículo
88 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A. (2015). Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
Open Access Artículo
90 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
Artículo
91 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D. (2015). Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
Open Access Artículo
92 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A. (2015). Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
Open Access Artículo
93 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A. (2015). Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
Open Access Artículo
94 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M. (2015). The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
Open Access Artículo
95 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J. (2015). High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
Open Access Artículo
96 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D. (2015). Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Artículo
97 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E. (2014). High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
98 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F. (2014). Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
99 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D. (2014). Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
100 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A. (2014). Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
101 - Sanchez-Flores,A., Abreu-Goodger,C. (2014). A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
102 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A. (2014). Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
103 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A. (2014). GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Artículo
105 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A. (2013). The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
106 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D. (2012). High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
Artículo
108 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D. (2011). High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
109 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M. (2011). Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
Capítulo internacional
111 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E. (2021). Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
Capítulo internacional
112 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E. (2021). Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
Open Access Memoria in extenso
113 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J. (2018). Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Nacional
114 - Sanchez-Flores,F. (2016). Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
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119 - Sanchez-Flores,F.A. (2025). Elección del Poder Judicial 2025: la ciudadanía entre la espada y la pared. Union de Morelos, 2 de abril.
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Preprint
122 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C. (2024). Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
Open Access Preprint
123 - Araujo-Flores,C.L., Moreno-Perlin,T., Macias-Zamora,J.V., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,F.A., Calcaneo-Hernandez,G., Silva-Jimenez,H. (2023). Physiology and Genome Sequence Analysis of the Pyrene-Tolerant Marine Strain Rhodococcus Ruber Msa14. SSRN, Preprint posted 17 July.
Open Access Nacional divulgacion
Preprint
125 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Open Access Preprint
126 - Geiger,O., Sanchez-Flores,A., Espositi,M.D. (2022). On the bacterial ancestry of mitochondria: new insights with triangulated approaches. bioRxiv, Preprint posted May 16.
Open Access Preprint
127 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Boukadida,C., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M. (2022). Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico_. bioRxiv, Preprint posted August 10.
Preprint
128 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2022). SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Preprint
129 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C. (2022). Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
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Open Access preprint
132 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E. (2021). Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
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138 - Sanchez-Flores,F.A. (2020). La impresión 3D y sus múltiples aplicaciones. La Unión de Morelos, 20 de enero.
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139 - Sanchez-Flores,F.A. (2020). Los efectos del ejercicio en nuestro cerebro. La Unión de Morelos, 06 de enero.
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140 - Sanchez-Flores,F.A. (2020). La carrera hacia la vacuna contra COVID-19 (Primera Parte). La Unión de Morelos, 07 de septiembre.
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141 - Sanchez-Flores,F.A. (2020). La carrera hacia la vacuna contra COVID-19 (Segunda Parte). La Unión de Morelos, 14 de septiembre.
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142 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Tercera parte). La Unión de Morelos, 07 de diciembre.
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144 - Sanchez-Flores,F.A. (2020). La situación actual del COVID-19 en México y en el mundo. La Unión de Morelos, 09 de marzo.
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145 - Sanchez-Flores,F.A. (2020). CÓMO LA CIENCIA ABIERTA PUEDE AYUDAR AL MUNDO EN UNA EPIDEMIA. La Unión de Morelos, 03 de febrero.
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148 - Sanchez-Flores,F.A. (2020). Los logros más importantes en ciencia y tecnología en el 2020. La Unión de Morelos, 28 de diciembre.
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149 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Primera parte). La Unión de Morelos, 23 de noviembre.
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150 - Sanchez-Flores,F.A. (2020). COVID19: A casi un año del inicio de la pandemia (Segunda parte). La Unión de Morelos, 30 de noviembre.
Open Access Preprint
152 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F. (2020). Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
153 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E. (2020). La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
154 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J. (2020). De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
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157 - Sanchez-Flores,F.A. (2019). Logros y potencial de la Biotecnología en México. La Unión de Morelos, 07 de octubre.
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158 - Sanchez-Flores,F.A. (2019). La ciencia y la belleza. ¿Ser atractivos nos da ventajas?. La Unión de Morelos, 09 de diciembre.
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159 - Sanchez-Flores,F.A. (2019). Animales fabulosos: Estrategias de supervivencia en la naturaleza. La Unión de Morelos, 16 de septiembre.
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160 - Sanchez-Flores,F.A. (2019). Los logros más importantes en ciencia y tecnología del 2019. La Unión de Morelos, 30 de diciembre.
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Open Access Divulgación
165 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
Open Access Divulgación
166 - Sanchez-Flores,A. (2015). Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
167 - Sanchez-Flores,A. (2015). Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
News Item
168 - Sanchez-Flores,A. (2012). Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
News Item
169 - Sanchez-Flores,A. (2011). A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
170 - Sanchez-Flores,A. (2011). A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
171 - Sanchez Flores, Fidel Alejandro (2007). Analisis de perfiles de entropia en familias estructurales de proteinas . Instituto de Biotecnologia, Doctor en Ciencias Bioquimicas, UNAM.
172 - Sanchez Flores, Fidel Alejandro (2001). Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *
Open Access Artículo
173 - Calderon-Ezquerro,M.C., Brunner-Mendoza,C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C., Ponce de Leon,A., Ortega-Rosas,C.I.. Genetic sequencing of the airborne fungal spectrum and air quality at a public hospital in Mexico City. PLOS Global Public Health, 5 (6), e0004784.
Open Access Artículo
174 - Martinez-Garcia,G., Estrada,K., Lira-Amaya,J.J., Santamaria-Epinosa,R.M., Lopez-Arellano,M.E., Sciutto-Conde,E.L., Rojas-Martinez,C., Alvarez-Martinez,J.A., Sanchez-Flores,A., Figueroa-Millan,J.V. Comparative Analysis of Immune Response Genes Induced by a Virulent or Attenuated Strain of Babesia bigemina. International Journal of Molecular Sciences, 26 (2), 487.
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Nacional divulgación
nacional divulgación
Nacional divulgación
178 - Sanchez-Flores,F.A.. Elección del Poder Judicial 2025: la ciudadanía entre la espada y la pared. Union de Morelos, 2 de abril.
Open Access Artículo
179 - Brunner-Mendoza,C., Calderon-Ezquerro,M.C., Guerrero-Guerra,C., Sanchez-Flores,A., Salinas-Peralta,I., Toriello,C.. Diversity and Composition of the Airborne Fungal Community in Mexico City with a Metagenomic Approach. Microorganisms, 12 (12), 2632.
Open Access Artículo
180 - Calderon-Ezquerro,M.C., Ponce de Leon,A.A., Brunner-Mendoza,C., Guerrero-Guerra,C.C., Sanchez-Flores,A., Salinas-Peralta,I., Lopez-Jacome,L.E., Colin-Castro,C.A, Martinez-Zavaleta,M.G.. Assessment of airborne bacteria from a public health institution in Mexico City. PLOS Global Public Health, 4 (11), e0003672.
Artículo
181 - Embarcadero-Jimenez,S., Araujo-Palomares,C.L., Moreno-Perlin,T., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,A., Calcaneo-Hernandez,G., Silva-Jimenez,H.. Physiology and comparative genomics of the haloalkalitolerant and hydrocarbonoclastic marine strain Rhodococcus ruber MSA14. Archives of Microbiology, 206 (7), 328.
Open Access Artículo
182 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
Open Access Artículo
Open Access Artículo
185 - Santamaria,R.M., Estrada,K., Lopez,M.E., Rojas,E., Martinez,G., Alcala,Y., Rojas,C., Alvarez,J.A., Lira,J.J., Santamaria,T.V., Sanchez-Flores,A., Figueroa,J.V.. Comparative Transcriptome Analysis of Babesia bigemina Attenuated Vaccine and Virulent Strains of Mexican Origin. Vaccines (Basel), 12 (3), 309.
Open Access Artículo
186 - Singh,P., Vydyam,P., Fang,T., Estrada,K., Gonzalez,L.M., Grande,R., Kumar,M., Chakravarty,S., Berry,V., Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Harb,O., Sanchez-Flores,A., Montero,E., Le Roch,K.G., Lonardi,S., Mamoun,C.B.. Insights Into the Evolution, Virulence and Speciation of Babesia MO1 and Babesia divergens Through Multiomics Analyses. Emerging Microbes and Infections, 13 (1), 2386136.
Nacional divulgacion
Nacional divulgacion
Preprint
189 - Singh,P., Vydyam,P., Fang,T., Kumar,M., Estrada,K., Grande,R., Sanchez-Flores,A., Gonzalez,L.M., Montero,E., Chakravarty,S., Lonardi,S., Berry,V,, Ranwez,V., Carcy,B., Depoix,D., Sanchez,S., Cornillot,E., Abel,S., Ciampossin,L., Lenz,T., Le Roch,K.G., Harb,O.S., Ben Mamoun,C.. Multiomics analysis reveals B. MO1 as a distinct Babesia species and provides insights into its evolution and virulence. bioRxiv, Preprint posted January 18.
Open Access Artículo
190 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Boukadida,C., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M.. Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico. Elife, 12, e82069.
Open Access Artículo
Open Access Artículo
192 - Geiger,O., Sanchez-Flores,A., Padilla-Gomez,J., Degli-Esposti M.. Multiple approaches of cellular metabolism define the bacterial ancestry of mitochondria. Science Advances, 9 (32), eadh0066.
Open Access Artículo
193 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M.. Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Articulo
194 - Murga-Garrido,S.M., Ulloa-Perez,E.J., Diaz-Benitez,C.E, Orbe-Orihuela,Y.C, Cornejo-Granados,F., Ochoa-Leyva,A, Sanchez-Flores,A, Cruz,M, Castaneda-Marquez,A.C, Plett-Torres,T, Burguete-Garcia,A.I., Lagunas-Martinez,A.. Virulence Factors of the Gut Microbiome Are Associated with BMI and Metabolic Blood Parameters in Children with Obesity. Microbiology Spectrum, 11 (2), e0338222.
Artículo
195 - Nabor-Romero,O., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Silva-Valenzuela,M., Vega-Arreguin,J., Sanchez-Flores,A., Rojas-Martinez,R.I. Transcriptional alterations induced by Nacobbus aberrans in interaction with chili pepper CM-334 and Phytophthora capsici. Physiological and Molecular Plant Pathology, 123, 101942.
Open Access Artículo
Open Access Artículo
197 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B.. Babesia duncani multi-omics identifies virulence factors and drug targets. Nature Microbiology, 8 (5), 845-859.
Open Access Artículo
198 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
Open Access Artículo
200 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F. Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Open Access Preprint
201 - Araujo-Flores,C.L., Moreno-Perlin,T., Macias-Zamora,J.V., Ramirez-Alvarez,N., Quezada-Hernandez,C., Batista-Garcia,R.A., Sanchez-Flores,F.A., Calcaneo-Hernandez,G., Silva-Jimenez,H.. Physiology and Genome Sequence Analysis of the Pyrene-Tolerant Marine Strain Rhodococcus Ruber Msa14. SSRN, Preprint posted 17 July.
Open Access Nacional divulgacion
Preprint
203 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Open Access Artículo
204 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P.. The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis. Frontiers in Cellular and Infection Microbiology, 12, 876839.
Open Access Artículo
205 - Boukadida,C., Taboada,B., Escalera-Zamudio,M., Isa,P., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Rincon-Rubio,A., Matias-Florentino,M., Paz-Juarez,H.E., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Hernandez-Rivas,L., Lopez,S., Lopez-Martinez,I, Avila-Rios,S., Arias,C.F.. Genomic Characterization of SARS-CoV-2 Isolated from Patients with Distinct Disease Outcomes in Mexico. Microbiology Spectrum, 10 (1), e01249-21.
Artículo
206 - Corona-Herrera,G.A., Navarrete-Ramirez,P., Sanchez-Flores,F.A., Jimenez-Jacinto,V., Martinez-Palacios,C.A., Palomera-Sanchez,Z., Volkoff,H., Martinez-Chavez,C.C.. Shining light on the transcriptome: Molecular regulatory networks leading to a fast-growth phenotype by continuous light in an environmentally sensitive teleost (Atherinopsidae). Journal of photochemistry and photobiology.B, Biology, 235, 112550.
Open Access Revisión
207 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C.. The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
208 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
Open Access Artículo
210 - Murga-Garrido,S.M., Orbe-Orihuela,Y.C., Diaz-Benitez,C.E., Castaneda-Marquez,A.C., Cornejo-Granados,F., Ochoa-Leyva,A., Sanchez-Flores,A., Cruz,M., Burguete-Garcia,A.I., Lagunas-Martinez,A.. Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity. Children, 9 (2), 148.
Open Access Artículo
211 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Vega-Arreguin,J., Ochoa-Martinez,D., Sanchez-Flores,A., Romo-Castillo,M.. Transcriptomic Analysis of the CM-334/P. capsici/N. aberrans Pathosystem to Identify Components in Plant Resistance and Resistance-Breaking Responses. International Journal of Plant Biology, 13 (2), 151-162.
Artículo
212 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I. Association of Gut Microbiota with Dietary-dependent Childhood Obesity. Archives of Medical Research, 53 (4), 407-415.
Open Access Carta nacional
213 - Perelman,C., Fastlicht,A., Sanchez-Flores,A., Wegman-Ostrosky,T.. Superspreading event of Covid-19 in adolescents: is there a difference between the vaccinated and the unvaccinated?. Salud Publica de Mexico, 64 (5, sept-oct), 446-447.
Open Access Artículo
Open Access Artículo
Open Access Artículo
216 - Sanchez-Correa,M.D.S., Isidra-Arellano,M.C., Pozas-Rodriguez,E.A., Reyero-Saavedra,M.D.R., Morales-Salazar,A., Del Castillo,S.M.L., Sanchez-Flores,A., Jimenez-Jacinto,V., Reyes,J.L., Formey,D., Valdes-Lopez,O.. Argonaute5 and its associated small RNAs modulate the transcriptional response during the rhizobia-Phaseolus vulgaris symbiosis. Frontiers in Plant Science, 13, 1034419.
Artículo
Open Access Artículo
218 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F.. Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
219 - Vazquez-Chacon,C.A., Rodriguez-Gaxiola,F.J., Sanchez-Flores,A., Montano,S., Bello-Rios,C., Fonseca-Coronado,S., Lopez-Carrera,C.F., Martinez-Guarneros,A., Parra-Unda,R., Garcia-Magallanes,N., Arambula-Meraz,E., Escobar-Gutierrez,A., Cruz-Rivera,M., Lopez-Duran,P.A.. Intra-host genetic population diversity: Role in emergence and persistence of drug resistance among Mycobacterium tuberculosis complex minor variants. Infection, Genetics and Evolution, 101, 105288.
Open Access Artículo
220 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F.. The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Open Access Preprint
221 - Geiger,O., Sanchez-Flores,A., Espositi,M.D.. On the bacterial ancestry of mitochondria: new insights with triangulated approaches. bioRxiv, Preprint posted May 16.
Open Access Preprint
222 - Castelan-Sanchez,H.G., Delaye,L., Inward,R.P.D., Dellicour,S., Gutierrez,B., Martinez de la Vina,N., Pybus,O.G., de Anda Jauregui,G., Guzman,P., Flores-Garrido,M., Fontanelli,O., Hernandez-Rosales,M., Meneses,A., Olmedo-Alvarez,G., Herrera-Estrella,A., Boukadida,C., Sanchez-Flores,A., Munoz-Medina,J.E., Comas-Garcia,A., Gomez-Gil,B., Zarate,S., Taboada,B., Lopez,S., Arias,C.F., Kraemer,M.U.G., Lazcano,A., Escalera-Zamudio,M.. Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico_. bioRxiv, Preprint posted August 10.
Preprint
223 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Preprint
224 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C.. Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa. bioRxiv, Preprint posted May 09.
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Nacional divulgación
Open Access Artículo
227 - Arevalos-Sanchez,M.M., Maynez-Perez,A.O., Rodriguez-Almeida,F.A., Martinez-Quintana,J.A., Sanchez-Flores,F.A., Felix-Portillo,M., Chavez-Martinez,A., Olvera-Garcia,M.E., Ruiz-Barrera,O., Corral-Luna,A.. In vitro assessment of two novel Cellulases from Trabulsiella odontotermitis for agricultural waste utilization. BMC Biotechnology, 21 (1), 26.
Open Access Artículo
228 - Barona-Gomez,F., Delaye,L., Diaz-Valenzuela,E., Plisson,F., Cruz-Perez,A., Diaz-Sanchez,M., Garcia-Sepulveda,C.A., Sanchez-Flores,A., Perez-Abreu,R., Valencia-Valdespino,F.J., Vega-Megana,N., Munoz-Valle,J.F., Garcia-Gonzalez,O.P., Bernal-Silva,S., Comas-Garcia,A., Cibrian-Jaramillo,A.. Phylogenomics and population genomics of SARS-CoV-2 in Mexico during the pre-vaccination stage reveals variants of interest B.1.1.28.4 and B.1.1.222 or B.1.1.519 and the nucleocapsid mutation S194L associated with symptoms. Microbial Genomics, 7 (11), 000684.
Open Access Artículo
229 - Escobar-Zepeda,A., Rosas-Escobar,P., Marquez-Valdelamar,L., de la Torre,P., Partida-Martinez,L.P., Remegaldo,R., Sanchez-Flores,A., Vergara,F.. Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote. BMC Research Notes, 14 (1), 333.
Artículo
230 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C.. Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease. Plant Disease, 105 (9).
Artículo
231 - Mora-Gonzalez,P.C., Espinosa-Luna,G., Ramirez-Higuera,A., Pena-Montes,C., Valerio-Alfaro,G., Sanchez-Flores,A, Quintana-Castro,R., Sanchez-Otero,M.G., Oliart-Ros,R.M.. Metagenomic Approach to Bacterial Diversity and Lipolytic Enzyme's Genes from a Steam Soil of Los Humeros Geothermal Field (Puebla, México). Geomicrobiology Journal, 38 (4), 304-314.
Open Access artículo
232 - Orta,A.H., Bush,S.J., Gutierrez-Mariscal,M., Castro-Obregon,S., Jaimes-Hoy,L., Grande,R., Vazquez,G., Gorostieta-Salas,E, Martinez-Pacheco,M., Diaz-Barba,K., Cornejo-Paramo,P., Sanchez,A., Tzekely,T., Urrutia,A.O., Cortez,D.. Rats exhibit age-related mosaic loss of chromosome Y. Communications Biology, 4, 1418.
Artículo
233 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Archives of Virology, 166, 3173-3177.
Open Access Artículo
234 - Taboada-Ramirez,B., Zarate,S., Isa,P., Boukadida,C., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramirez-Gonzalez,J.E., Comas-Garcia,A., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Verleyen,J., Barrera-Badillo,G., Hernandez-Rivas,L., Mejia-Nepomuceno,F., Martinez-Orozco,J.A., Becerril-Vargas,E., Lopez,S., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Genetic Analysis of SARS-CoV-2 Variants in Mexico during the First Year of the COVID-19 Pandemic. Viruses, 13 (11), 2161.
Artículo
235 - Valencia-Morales,M.D.P., Sanchez-Flores,A., Colin-Castelan,D., Alvarado-Caudillo,Y., Fragoso-Bargas,N., Lopez-Gonzalez,G., Pena-Lopez,T., Ramirez-Nava,M., de la Rocha,C., Rodriguez-Rios,D., Lund,G., Zaina,S.. Somatic genetic mosaicism in the apolipoprotein E-null mouse aorta. Thrombosis and Haemostasis, 121 (11), 1541-1553.
Capítulo internacional
236 - Fernandez-Garcia,M., Sanchez-Flores,A., Gonzalez,L.M., Barbas,C., Rey-Stolle,M.F., Sevilla,E., Garcia,A., Montero,E.. Integration of Functional Genomic, Transcriptomic, and Metabolomic Data to Identify Key Features in Genomic Expression, Metabolites, and Metabolic Pathways of Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 217-249.
Capítulo internacional
237 - Gonzalez,L.M., Sevilla,E., Fernandez-Garcia,M., Sanchez-Flores,A., Montero,E.. Integration of Genomic and Transcriptomic Data to Elucidate Molecular Processes in Babesia divergens. Parasite Genomics. Methods in Molecular Biology vol 2369, 199-215.
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Open Access preprint
239 - Rodriguez-Maldonado,A.P., Vazquez-Perez,J.A., Cedro-Tanda,A., Taboada,B., Boukadida,C., Wong-Arambula,C., Nunez-Garcia,T.E., Cruz-Ortiz,N., Barrera-Badillo,G., Hernandez-Rivas L., Lopez-Martinez,I., Mendoza-Vargas,A., Reyes-Grajeda,J.P., Alcaraz,N., Penaloza-Figueroa,F., Gonzalez-Barrera,D., Rangel-DeLeon,D., Herrera-Montalvo,L.A., Mejia-Nepomuceno,F., Hernandez-Teran,A., Mujica-Sanchez,M., Becerril-Vargas,E., Martinez-Orozco,J.A., Perez-Padilla,R., Salas-Hernandez,J., Sanchez-Flores,A., Isa,P., Matias-Florentino,M., Avila-Rios,S., Munoz-Medina,J.E., Grajales-Muniz,C., Salas-Lais,A.G., Santos Coy-Arechavaleta,A., Hidalgo-Miranda,A., Arias,C.F., Ramirez-Gonzalez,J.E.. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Medarxiv, Preprint posted Posted May 20.
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246 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S.. Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales). Genes (Basel), 11 (7), 830.
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Artículo
248 - Hernandez-Valle,J., Sanchez-Flores,A., Poggio,S., Dreyfus,G., Camarena,L.. The CtrA regulon of Rhodobacter sphaeroides favors adaptation to a particular life style. Journal of Bacteriology, 202 (7), 00678-19.
Open Access Artículo
249 - Nabor-Romero,O., Rojas-Martinez,R.I., Ochoa-Martinez,D.L., Vega-Arreguin,J., Sanchez-Flores,F.A., Zavaleta-Mejia,E. Avances en el conocimiento sobre el rompimiento de la resistencia de chile cm-334 (capsicum annuum l.) A phytophthora capsici por nacobbus aberrans. Nematropica, 50 (1), 45-58.
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253 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez A., Garces-Ayala F., Gonzalez-Bonilla,C.R., Grajales-Muniz C., Borja-Aburto,V, Barrera-Badillo G., Lopez,S., Hernandez-Rivas L., Perez-Padilla,R., Lopez-Martinez,I, Avila-Rios,S., Ruiz-Palacios,G., Ramirez-Gonzalez,J.E., Arias,C.F.. Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico. Journal of Virology, 94 (18), e01056-20.
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254 - Sanchez-Flores,F.A.. La impresión 3D y sus múltiples aplicaciones. La Unión de Morelos, 20 de enero.
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255 - Sanchez-Flores,F.A.. Los efectos del ejercicio en nuestro cerebro. La Unión de Morelos, 06 de enero.
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268 - Taboada,B., Vazquez-Perez,J.A., Munoz-Medina,J.E., Ramos-Cervantes,P., Escalera-Zamudio,M., Boukadida,C., Sanchez-Flores,A., Isa,P., Mendieta-Condado,E., Martinez-Orozco,J.A., Becerril-Vargas,E., Salas-Hernandez,J., Grande,R., Gonzalez-Torres,C., Gaytan-Cervantes,F.J., Vazquez,G., Pulido,F., Araiza-Rodriguez,A., Garces-Ayala,F., Gonzalez-Bonilla,C.R., Grajales-Muniz,C., Borja-Aburto,V.H, Barrera-Badillo,G, Lopez,S., Hernandez-Rivas,L, Perez-Padilla,R, Lopez Martinez,I, Avila-Rios,S, Ruiz-Palacios,G, Ramirez-Gonzalez,J.E, Arias,C.F.. Genomic analysis of early SARS-CoV-2 strains introduced in Mexico. bioRxiv, Preprint posted May 30, 120402.
Open Access Divulgación
269 - Valderrama-Blanco,M.B., Sanchez-Flores,F.A., Burguete-Garcia,A.I., Orozco-Nunez,E.. La colaboración Academia-Gobierno como un elemento importante para la atención temprana de la pandemia de COVID-19 en Cuernavaca. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 22, 18-22.
Open Access Preprint
270 - Velasquez,L.F., Canton,P.E., Sanchez-Flores,A., Bravo,A., Ceron,J.. De novo transcriptome assembly of Premnotrypes vorax (Coleoptera: Curculionidae). Research Square, Preprint posted 17 Jan.
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Artículo
272 - Garcia-Lopez,G., Avila-Gonzalez,D., Garcia-Castro,I.L., Flores-Herrera,H., Molina-Hernandez,A., Portillo,W., Diaz-Martinez,N.E., Sanchez-Flores,A., Verleyen,J., Merchant-Larios,H., Diaz,N.F.. Pluripotency markers in tissue and cultivated cells in vitro of different regions of human amniotic epithelium. Experimental Cell Research, 375 (1), 31-41.
Open Access Artículo
273 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.
Open Access Artículo
Open Access Artículo
275 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S.. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales). Plants (Basel), 8 (10), 392.
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278 - Sanchez-Flores,F.A.. Logros y potencial de la Biotecnología en México. La Unión de Morelos, 07 de octubre.
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Artículo
286 - Barreto-Curiel, F., Ramirez-Puebla, S. T., Ringo, E., Escobar-Zepeda, A., Godoy-Lozano, E., Vazquez-Duhalt, R., Sanchez-Flores, A., Viana, M. T.. Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi. Animal Feed Science and Technology, 245, 91-103.
Artículo
287 - Carrillo-Tapia, E., Garcia-Garcia, E., Herrera-Gonzalez, N.E., Yamazaki-Nakashimada, M.A., Staines-Boone, A.T., Segura-Mendez, N.H., Scheffler-Mendoza, S.C., Farrill-Romanillos, O., Gonzalez-Serrano, M.E., Rodriguez-Alba, J.C., Santos-Argumedo, L., Berron-Ruiz, L., Sanchez-Flores, A., Lopez-Herrera, G.. Delayed diagnosis in X-linked agammaglobulinemia and its relationship to the occurrence of mutations in BTK non-kinase domains. Expert Review of Clinical Immunology, 14 (1), 83-93.
Open Access Artículo
288 - Contreras-Castro, L., Maldonado, L.A., Quintana, E.T., Raggi, L., Sanchez-Flores, A.. Draft Genome Sequence of Two Marine Plantactinospora spp. from the Gulf of California. Microbiology Resource Announcements, 6 (21), e00436-18.
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Artículo
290 - Garcia, C.F., Pedrini, N., Sanchez-Paz, A., Reyna-Blanco, C.S., Lavarias, S., Muhlia-Almazan, A., Fernandez-Gimenez, A., Laino, A., de-la-Re-Vega, E., Lukaszewicz, G., Lopez-Zavala, A.A., Brieba, L.G., Criscitello, M.F., Carrasco-Miranda, J.S., Garcia-Orozco, K.D., Ochoa-Leyva, A., Rudino-Pinera, E., Sanchez-Flores, A., Sotelo-Mundo, R.R.. De novo assembly and transcriptome characterization of the freshwater prawn Palaemonetes argentinus: Implications for a detoxification response. Marine Genomics, 37, 74-81.
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Open Access Artículo
293 - Munoz-Medina,J.E., Garcia-Knight,M.A., Sanchez-Flores,A., Monroy-Munoz,I.E., Grande,R., Esbjornsson,J., Santacruz-Tinoco,C.E., Gonzalez-Bonilla,C.R.. Evolutionary analysis of the Chikungunya virus epidemic in Mexico reveals intra-host mutational hotspots in the E1 protein. PLoS ONE, 13 (12), e0209292.
Artículo
294 - Olvera-Garcia, M., Sanchez-Flores, A., Quirasco, Baruch M.. Genomic and functional characterisation of two Enterococcus strains isolated from Cotija cheese and their potential role in ripening. Applied Microbiology and Biotechnology, 102 (5), 102490, 2251-2267.
Artículo
295 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M.. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.
Open Access Memoria in extenso
296 - Nabor-Romero,O., Rojas-Martinez,R.I., Zavaleta-Mejia,E., Ochoa-Martinez,D.L., Sanchez-Flores,F.A., Vega-Arreguin,J.. Análisis del transcriptoma de chile cm-334 en el rompimiento de resistencia a Phytophthora capsici por Nacobbus aberrans. Memoria del Simposio Avances de Investigación Posgrado en Fitosanidad Colegio de Postgraduados 22 agosto 2018. 89-94, Chapingo: Colegio de Posgraduados.
Open Access Artículo
297 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A.. Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.
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Open Access Artículo
299 - Sandoval-Azuara, S.E., Perea-Jacobo, R., Muniz-Salazar, R., Robbe-Austerman, S., Perera-Ortiz, A., Lopez-Valencia, G., Bravo, D.M., Sanchez-Flores, A., Miranda-Guzman, D., Flores-Lopez, C.A., Zenteno-Cuevas, R., Laniado-Laborin, R., Lafarga de la, Cruz F., Stuber, T.P.. Whole genome sequencing of Mycobacterium bovis to obtain molecular fingerprints in human and cattle isolates from Baja California, Mexico. International Journal of Infectious Diseases, 63, 48-56.
Open Access Artículo
300 - Titulaer, M., Melgoza-Castillo, A., Panjabi, A.O., Sanchez-Flores, A., Martinez-Guerrero, J.H., Macias-Duarte, A., Fernandez, J.A.. Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species. PLoS ONE, 12 (12), e0189695.
Open Access Divulgación
301 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.
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Artículo
304 - Hunt,V.L., Tsai,I.J., Coghlan,A., Reid,A.J., Holroyd,N., Foth,B.J., Tracey,A., Cotton,J.A., Stanley,E.J., Beasley,H., Bennett,H.M., Brooks,K., Harsha,B., Kajitani,R., Kulkarni,A., Harbecke,D., Nagayasu,E., Nichol,S., Ogura,Y., Quail,M.A., Randle,N., Xia,D., Brattig,N.W., Soblik,H., Ribeiro,D.M., Sanchez-Flores,A., Hayashi,T., Itoh,T., Denver,D.R., Grant,W., Stoltzfus,J.D., Lok,J.B., Murayama,H., Wastling,J., Streit,A., Kikuchi,T., Viney,M., Berriman,M.. The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48, 299-307.
Open Access Artículo
305 - Ramirez-Puebla,S.T., Ormeno-Orrillo,E., Vera-Ponce de Leon A., Lozano,L., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Genomes of Candidatus Wolbachia bourtzisii wDacA and Candidatus Wolbachia pipientis wDacB from the Cochineal Insect Dactylopius coccus (Hemiptera: Dactylopiidae). G3: Genes, Genomes, Genetics, 6 (10), 3343-3349.
Open Access Artículo
306 - Rodriguez-Anaya,L.Z., Ibarra-Gamez,J.C., Lares-Villa,F., Casillas-Hernandez,R., Sanchez-Flores,A., Gonzalez-Galaviz,J.R.. Analysis of repeated compound units in ORF94 of white spot syndrome virus isolated from Litopenaeus vannamei from outbreak and non-outbreak shrimp farms in Sonora, Mexico. Latin American Journal of Aquatic Research, 44 (4), 850-854.
Open Access Artículo
307 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A.. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico. Genome Announcements, 4 (2).
Open Access Artículo
308 - Sanchez-Flores,A., Penazola,F., Carpinteyro-Ponce,J., Nazario-Yepiz,N., Abreu-Goodger,C., Machado,C.A., Markow,T.A.. Genome Evolution in Three Species of Cactophilic Drosophila. G3: Genes, Genomes, Genetics, 6 (10), 3097-3105.
Open Access Artículo
309 - Vera-Ponce De Leon,A., Sanchez-Flores,A., Rosenblueth,M., Martinez-Romero,E.. Fungal Community Associated with Dactylopius (Hemiptera: Coccoidea: Dactylopiidae) and Its Role in Uric Acid Metabolism. Frontiers in Microbiology, 7, 954.
Nacional
310 - Sanchez-Flores,F.. Secuenciacion masiva en la era genomica. Genómica estructural y funcional en las enfermedades multifactoriales. Mexico: Leea Editorial.
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312 - Dautt-Castro,M., Ochoa-Leyva,A., Contreras-Vergara,C.A., Pacheco-Sanchez,M.A., Casas-Flores,S., Sanchez-Flores,A., Kuhn,D.N., Islas-Osuna,M.A.. Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening. Frontiers in Plant Science, 6.
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314 - Fontes-Perez,H., Olvera-Garcia,M., Chavez-Martinez,A., Rodriguez-Almeida,F.A., Arzola-Alvarez,C.A., Sanchez-Flores,A., Corral-Luna,A.. Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus. Genome Announcements, 3 (6), art. no. e0129015.
Artículo
315 - Glover,L., Alsford,S., Baker,N., Turner,D.J., Sanchez-Flores,A., Hutchinson,S., Hertz-Fowler,C., Berriman,M., Horn,D.. Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols, 10 (1), 106-133.
Open Access Artículo
316 - Gomez-Angulo,J., Vega-Alvarado,L., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Arrizon,J., Sanchez-Flores,A.. Genome Sequence of Torulaspora delbrueckii NRRL Y-50541, Isolated from Mezcal Fermentation. Genome Announcements, 3 (4).
Open Access Artículo
317 - Olvera-Garcia,M., Fontes-Perez,H., Chavez-Martinez,A., Ruiz-Barrera O., Rodriguez-Almeida,F.A., Sanchez-Flores,A., Corral-Luna,A.. Draft Genome Sequences for Five Strains of Trabulsiella odontotermitis, Isolated from Heterotermes sp. Termite Gut. Genome Announcements, 3 (6), art. no. e0128915.
Open Access Artículo
318 - Valencia-Morales,Mdel P., Zaina,S., Heyn,H., Carmona,F.J., Varol,N., Sayols,S., Condom,E., Ramirez-Ruz,J., Gomez,A., Moran,S., Lund,G., Rodriguez-Rios,D., Lopez-Gonzalez,G., Ramirez-Nava,M., de la Rocha C., Sanchez-Flores,A., Esteller,M.. The DNA methylation drift of the atherosclerotic aorta increases with lesion progression. BMC Medical Genomics, 8 (1), 85.
Open Access Artículo
319 - Vega-Alvarado,L., Gomez-Angulo,J., Escalante-Garcia,Z., Grande,R., Gschaedler-Mathis,A., Amaya-Delgado,L., Sanchez-Flores,A., Arrizon,J.. High-Quality Draft Genome Sequence of Candida apicola NRRL Y-50540. Genome Announcements, 3 (3).
Open Access Artículo
320 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D.. Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions. G3: Genes, Genomes, Genetics, 5 (9), 1805-1814.
Open Access Divulgación
321 - Sanchez-Flores,A.. Las nuevas tecnologías y el cómputo nos ayudan a estudiar detalladamente a los patógenos. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 3-4.
Open Access Divulgación
322 - Sanchez-Flores,A.. Unidad de Secuenciación Masiva y Bioinformática, a la vanguardia de la ciencia. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 2, 23-24.
Open Access Artículo
323 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E.. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis. Genome Announcements, 2 (6).
Open Access Artículo
324 - Ghaffari,N., Sanchez-Flores,A., Doan,R., Garcia-Orozco,K.D., Chen,P.L., Ochoa-Leyva,A., Lopez-Zavala,A.A., Carrasco,J.S., Hong,C., Brieba,L.G., Rudino-Pinera,E., Blood,P.D., Sawyer,J.E., Johnson,C.D., Dindot,S.V., Sotelo-Mundo,R.R., Criscitiello,M.F.. Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture. Scientific Reports, 4, 7081.
Artículo
325 - Oliveira,P.D., Lima,F.M., Cruz,M.C., Ferreira,R.C., Sanchez-Flores,A., Cordero,E.M., Cortez,D.R., Ferreira,E.R., Briones,M.R., Mortara,R.A., Silveira,J.F., Bahia,D.. Trypanosoma cruzi: Genome characterization of phosphatidylinositol kinase gene family (PIK and PIK-related) and identification of a novel PIK gene. Infection, Genetics and Evolution, 25, 157-165.
Artículo
326 - Reid,A.J., Blake,D.P., Ansari,H.R., Billington,K., Browne,H.P., Bryant,J.M., Dunn,M., Hung,S.S., Kawahara,F., Miranda-Saavedra,D., Malas,T., Mourier,T., Naghra,H., Nair,M., Otto,T.D., Rawlings,N.D., Rivailler,P., Sanchez-Flores,A., Sanders,M., Subramaniam,C., Tay,Y.L., Woo,Y., Wu,X., Barrell,B., Dear,P.H., Doerig,C., Gruber,A., Ivens,A.C., Parkinson,J., Rajandream,M.A., Shirley,M.W., Wan,K.L., Berriman,M., Tomley,F.M., Pain,A.. Genomic analysis of the causative agents of coccidiosis in domestic chickens. Genome Research, 24, 1676-1685.
Revisión
327 - Sanchez-Flores,A., Abreu-Goodger,C.. A Practical Guide to Sequencing Genomes and Transcriptomes. Current Topics in Medicinal Chemistry, 14 (3), 398-406.
Artículo
328 - Sotillo,J., Sanchez-Flores,A., Cantacessi,C., Harcus,Y., Pickering,D., Bouchery,T., Camberis,M., Tang,S.C., Giacomin,P., Mulvenna,J., Mitreva,M., Berriman,M., LeGros,G., Maizels,R.M., Loukas,A.. Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Molecular and Cellular Proteomics, 13 (10), 2736-2751. *
Revisión
329 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A.. GARM: Genome Assembly, Reconciliation and Merging pipeline. Current Topics in Medicinal Chemistry, 14 (3), 418-424.
Open Access Revisión
Artículo
331 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A.. The genomes of four tapeworm species reveal adaptations to parasitism. Nature, 496 (7443), 57-63.
Artículo
332 - Alsford,S., Eckert,S., Baker,N., Glover,L., Sanchez-Flores,A., Leung,K.F., Turner,D.J., Field,M.C., Berriman,M., Horn,D.. High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384), 232-236. *
Revisión
News Item
334 - Sanchez-Flores,A.. Sequencing parasite populations. Nature Reviews Microbiology, 10 (2), 85. *
Artículo
335 - Alsford,S., Turner,D.J., Obado,S.O., Sanchez-Flores,A., Glover,L., Berriman,M., Hertz-Fowler,C., Horn,D.. High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. Genome Research, 21 (6), 915-924. *
Open Access Artículo
336 - Kikuchi,T., Cotton,J.A., Dalzell,J.J., Hasegawa,K., Kanzaki,N., McVeigh,P., Takanashi,T., Tsai,I.J., Assefa,S.A., Cock,P.J., Otto,T.D., Hunt,M., Reid,A.J., Sanchez-Flores,A., Tsuchihara,K., Yokoi,T., Larsson,M.C., Miwa,J., Maule,A.G., Sahashi,N., Jones,J.T., Berriman,M.. Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLoS Pathogens, 7 (9), e1002219. *
News Item
337 - Sanchez-Flores,A.. A new piece of the eukaryotic puzzle. Nature Reviews Microbiology, 9 (11), 769. *
News Item
338 - Sanchez-Flores,A.. A 'clap' for in silico studies. Nature Reviews Microbiology, 9 (1), 7. *
341 - Sanchez Flores, Fidel Alejandro. Expresion recombinante de la cloro de la cloroperoxidasa de Caldariomy fumago. Instituto de Investigaciones Biomedicas, Licenciatura en Investigacion Biomedica Basica, UNAM. *