M.C. Veronica Jimenez Jacinto
Técnico Académico
Total de publicaciones: 18
- Tipo
- Fecha
Artículo
1 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A. (2021). High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
Artículo
2 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes.
PLoS Neglected Tropical Diseases,
13 (8),
e0007680.
Artículo
3 - Jimenez-Jacinto,V., Sanchez-Flores,A., Vega-Alvarado,L. (2019). Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis.
Frontiers in Genetics,
10,
279.
Artículo
4 - Solano de la Cruz M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L.G., Escobar-Hernandez,E.E., Luna-Rodriguez,M. (2019). Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae.
BMC Genomics,
20 (1),
826.
Artículo
5 - Chowdhury-Paul, S., Pando-Robles, V., Jimenez-Jacinto, V., Segura, D., Espin, G., Nunez, C. (2018). Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment.
Journal of Proteomics,
181,
47-59.
Artículo
6 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M. (2018). Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes.
Molecular Genetics and Genomics,
293 (5),
1205-1216.
Artículo
7 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A. (2017). Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia.
Scientific Reports,
7 (1),
15043.
Artículo
8 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2016). Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Artículo
9 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J. (2013). RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
10 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J. (2011). RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
11 - Demir,E., Cary,M.P., Paley,S., Fukuda,K., Lemer,C., Vastrik,I., Wu,G., D'Eustachio,P., Schaefer,C., Luciano,J., Schacherer,F., Martinez-Flores,I., Hu,Z., Jimenez-Jacinto,V., Joshi-Tope,G., Kandasamy,K., Lopez-Fuentes,A.C., Mi,H., Pichler,E., Rodchenkov,I., Splendiani,A., Tkachev,S., Zucker,J., Gopinath,G., Rajasimha,H., Ramakrishnan,R., Shah,I., Syed,M., Anwar,N., Babur,O., Blinov,M., Brauner,E., Corwin,D., Donaldson,S., Gibbons,F., Goldberg,R., Hornbeck,P., Luna,A., Murray-Rust,P., Neumann,E., Reubenacker,O., Samwald,M., van Iersel,M., Wimalaratne,S., Allen,K., Braun,B., Whirl-Carrillo,M., Cheung,K.H., Dahlquist,K., Finney,A., Gillespie,M., Glass,E., Gong,L., Haw,R., Honig,M., Hubaut,O., Kane,D., Krupa,S., Kutmon,M., Leonard,J., Marks,D., Merberg,D., Petri,V., Pico,A., Ravenscroft,D., Ren,L., Shah,N., Sunshine,M., Tang,R., Whaley,R., Letovksy,S., Buetow,K.H., Rzhetsky,A., Schachter,V., Sobral,B.S., Dogrusoz,U., McWeeney,S., Aladjem,M., Birney,E., Collado-Vides,J., Goto,S., Hucka,M., Le Novere,N., Maltsev,N., Pandey,A., Thomas,P., Wingender,E., Karp,P.D., Sander,C., Bader,G.D. (2010). The BioPAX community standard for pathway data sharing.
Nature Biotechnology,
28 (9),
935-942 (corrigendum vol 30 p 365 2012).
*
Artículo
12 - Martinez-Flores,I., Jimenez-Jacinto,V., Lopez-Fuentes,A., Collado-Vides,J. (2010). Expanding BioPAX format by integrating Gene Regulation.
EMBnet.journal,
16 (1),
39-43.
*
Artículo
13 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E. (2009). Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
14 - Martinez-Antonio,A., Salgado,H., Gama-Castro,S., Gutierrez-Rios,R.M., Jimenez-Jacinto,V., Collado-Vides,J. (2003). Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach.
Biotechnology and Bioengineering,
84 (7),
743-749.
*
Revisión
15 - Jimenez-Jacinto,V., Gomez-Romero,L., Mendez-Cruz,C.F. (2020). Pattern Recognition Applied to the Analysis of Genomic Data and Its Association to Diseases. Pattern Recognition Techniques Applied to Biomedical Problems.
STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics & Health,
35-61,
Cham: Springer International Publishing.
Nacional
16 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K. (2015). Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Preprint
17 - Solano de la Cruz,M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L., Escobar-Hernandez,E.E., Luna-Rodriguez,M. (2019). Increase in ribosomal proteins activity: Translational reprogramming in Vanilla planifolia Jacks., against Fusarium infection.
bioRxiv,
Preprint posted June 05, 2019,
660860.
Divulgación
18 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
8,
29-32.
Artículo
19 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A.. High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
Revisión
20 - Jimenez-Jacinto,V., Gomez-Romero,L., Mendez-Cruz,C.F.. Pattern Recognition Applied to the Analysis of Genomic Data and Its Association to Diseases. Pattern Recognition Techniques Applied to Biomedical Problems.
STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics & Health,
35-61,
Cham: Springer International Publishing.
Artículo
21 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes.
PLoS Neglected Tropical Diseases,
13 (8),
e0007680.
Artículo
22 - Jimenez-Jacinto,V., Sanchez-Flores,A., Vega-Alvarado,L.. Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis.
Frontiers in Genetics,
10,
279.
Artículo
23 - Solano de la Cruz M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L.G., Escobar-Hernandez,E.E., Luna-Rodriguez,M.. Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae.
BMC Genomics,
20 (1),
826.
Preprint
24 - Solano de la Cruz,M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L., Escobar-Hernandez,E.E., Luna-Rodriguez,M.. Increase in ribosomal proteins activity: Translational reprogramming in Vanilla planifolia Jacks., against Fusarium infection.
bioRxiv,
Preprint posted June 05, 2019,
660860.
Artículo
25 - Chowdhury-Paul, S., Pando-Robles, V., Jimenez-Jacinto, V., Segura, D., Espin, G., Nunez, C.. Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment.
Journal of Proteomics,
181,
47-59.
Artículo
26 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M.. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes.
Molecular Genetics and Genomics,
293 (5),
1205-1216.
Artículo
27 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A.. Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia.
Scientific Reports,
7 (1),
15043.
Divulgación
28 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
8,
29-32.
Artículo
29 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Nacional
30 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K.. Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Artículo
31 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J.. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
32 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J.. RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
33 - Demir,E., Cary,M.P., Paley,S., Fukuda,K., Lemer,C., Vastrik,I., Wu,G., D'Eustachio,P., Schaefer,C., Luciano,J., Schacherer,F., Martinez-Flores,I., Hu,Z., Jimenez-Jacinto,V., Joshi-Tope,G., Kandasamy,K., Lopez-Fuentes,A.C., Mi,H., Pichler,E., Rodchenkov,I., Splendiani,A., Tkachev,S., Zucker,J., Gopinath,G., Rajasimha,H., Ramakrishnan,R., Shah,I., Syed,M., Anwar,N., Babur,O., Blinov,M., Brauner,E., Corwin,D., Donaldson,S., Gibbons,F., Goldberg,R., Hornbeck,P., Luna,A., Murray-Rust,P., Neumann,E., Reubenacker,O., Samwald,M., van Iersel,M., Wimalaratne,S., Allen,K., Braun,B., Whirl-Carrillo,M., Cheung,K.H., Dahlquist,K., Finney,A., Gillespie,M., Glass,E., Gong,L., Haw,R., Honig,M., Hubaut,O., Kane,D., Krupa,S., Kutmon,M., Leonard,J., Marks,D., Merberg,D., Petri,V., Pico,A., Ravenscroft,D., Ren,L., Shah,N., Sunshine,M., Tang,R., Whaley,R., Letovksy,S., Buetow,K.H., Rzhetsky,A., Schachter,V., Sobral,B.S., Dogrusoz,U., McWeeney,S., Aladjem,M., Birney,E., Collado-Vides,J., Goto,S., Hucka,M., Le Novere,N., Maltsev,N., Pandey,A., Thomas,P., Wingender,E., Karp,P.D., Sander,C., Bader,G.D.. The BioPAX community standard for pathway data sharing.
Nature Biotechnology,
28 (9),
935-942 (corrigendum vol 30 p 365 2012).
*
Artículo
34 - Martinez-Flores,I., Jimenez-Jacinto,V., Lopez-Fuentes,A., Collado-Vides,J.. Expanding BioPAX format by integrating Gene Regulation.
EMBnet.journal,
16 (1),
39-43.
*
Artículo
35 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E.. Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
36 - Martinez-Antonio,A., Salgado,H., Gama-Castro,S., Gutierrez-Rios,R.M., Jimenez-Jacinto,V., Collado-Vides,J.. Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach.
Biotechnology and Bioengineering,
84 (7),
743-749.
*
- Teléfonos
-
Laboratorio +52 (777) 329-1777 ext 38151.
desde la CDMX 562-27777 ext 38151
Red UNAM 38151
Unidad de Secuencia Masiva y Bioinformática
- Teléfonos Oficina +52 (777) 329-1777151
desde la CDMX 562-2777738151.
red UNAM 38151