M.C. Veronica Jimenez Jacinto

Consorcio Mexicano de Vigilancia Genómica

M.C. Veronica Jimenez Jacinto

Técnico Académico

1 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A. (2021). High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth. PLoS ONE, 16 (3), e0248513.

Artículo

2 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.

Artículo

3 - Jimenez-Jacinto,V., Sanchez-Flores,A., Vega-Alvarado,L. (2019). Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis. Frontiers in Genetics, 10, 279.

Artículo

4 - Solano de la Cruz M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L.G., Escobar-Hernandez,E.E., Luna-Rodriguez,M. (2019). Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae. BMC Genomics, 20 (1), 826.

Artículo

5 - Chowdhury-Paul, S., Pando-Robles, V., Jimenez-Jacinto, V., Segura, D., Espin, G., Nunez, C. (2018). Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment. Journal of Proteomics, 181, 47-59.

Artículo

6 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M. (2018). Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.

Artículo

7 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A. (2017). Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.

Artículo

8 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2016). Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors. Fems Microbiology Letters, 363 (17), fnw175.

Artículo

9 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J. (2013). RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Research, 41 (D1), D203-D213.

Artículo

10 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J. (2011). RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units). Nucleic Acids Research, 39 (Suppl 1), D98-D105.

Artículo

11 - Demir,E., Cary,M.P., Paley,S., Fukuda,K., Lemer,C., Vastrik,I., Wu,G., D'Eustachio,P., Schaefer,C., Luciano,J., Schacherer,F., Martinez-Flores,I., Hu,Z., Jimenez-Jacinto,V., Joshi-Tope,G., Kandasamy,K., Lopez-Fuentes,A.C., Mi,H., Pichler,E., Rodchenkov,I., Splendiani,A., Tkachev,S., Zucker,J., Gopinath,G., Rajasimha,H., Ramakrishnan,R., Shah,I., Syed,M., Anwar,N., Babur,O., Blinov,M., Brauner,E., Corwin,D., Donaldson,S., Gibbons,F., Goldberg,R., Hornbeck,P., Luna,A., Murray-Rust,P., Neumann,E., Reubenacker,O., Samwald,M., van Iersel,M., Wimalaratne,S., Allen,K., Braun,B., Whirl-Carrillo,M., Cheung,K.H., Dahlquist,K., Finney,A., Gillespie,M., Glass,E., Gong,L., Haw,R., Honig,M., Hubaut,O., Kane,D., Krupa,S., Kutmon,M., Leonard,J., Marks,D., Merberg,D., Petri,V., Pico,A., Ravenscroft,D., Ren,L., Shah,N., Sunshine,M., Tang,R., Whaley,R., Letovksy,S., Buetow,K.H., Rzhetsky,A., Schachter,V., Sobral,B.S., Dogrusoz,U., McWeeney,S., Aladjem,M., Birney,E., Collado-Vides,J., Goto,S., Hucka,M., Le Novere,N., Maltsev,N., Pandey,A., Thomas,P., Wingender,E., Karp,P.D., Sander,C., Bader,G.D. (2010). The BioPAX community standard for pathway data sharing. Nature Biotechnology, 28 (9), 935-942 (corrigendum vol 30 p 365 2012). *

Artículo

12 - Martinez-Flores,I., Jimenez-Jacinto,V., Lopez-Fuentes,A., Collado-Vides,J. (2010). Expanding BioPAX format by integrating Gene Regulation. EMBnet.journal, 16 (1), 39-43. *

Artículo

13 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E. (2009). Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli. PLoS ONE, 4 (10), e7526.

Artículo

14 - Martinez-Antonio,A., Salgado,H., Gama-Castro,S., Gutierrez-Rios,R.M., Jimenez-Jacinto,V., Collado-Vides,J. (2003). Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach. Biotechnology and Bioengineering, 84 (7), 743-749. *

Capítulos

Revisión

15 - Jimenez-Jacinto,V., Gomez-Romero,L., Mendez-Cruz,C.F. (2020). Pattern Recognition Applied to the Analysis of Genomic Data and Its Association to Diseases. Pattern Recognition Techniques Applied to Biomedical Problems. STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics & Health, 35-61, Cham: Springer International Publishing.

Nacional

16 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K. (2015). Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014. 1269-1276, 3, Mexico D.F..

Otras publicaciones

Preprint

17 - Solano de la Cruz,M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L., Escobar-Hernandez,E.E., Luna-Rodriguez,M. (2019). Increase in ribosomal proteins activity: Translational reprogramming in Vanilla planifolia Jacks., against Fusarium infection. bioRxiv, Preprint posted June 05, 2019, 660860.

Divulgación

18 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.

2021

Artículo

19 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A.. High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth. PLoS ONE, 16 (3), e0248513.

2020

Revisión

20 - Jimenez-Jacinto,V., Gomez-Romero,L., Mendez-Cruz,C.F.. Pattern Recognition Applied to the Analysis of Genomic Data and Its Association to Diseases. Pattern Recognition Techniques Applied to Biomedical Problems. STEAM-H: Science, Technology, Engineering, Agriculture, Mathematics & Health, 35-61, Cham: Springer International Publishing.

2019

Artículo

21 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes. PLoS Neglected Tropical Diseases, 13 (8), e0007680.

Artículo

22 - Jimenez-Jacinto,V., Sanchez-Flores,A., Vega-Alvarado,L.. Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis. Frontiers in Genetics, 10, 279.

Artículo

23 - Solano de la Cruz M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L.G., Escobar-Hernandez,E.E., Luna-Rodriguez,M.. Functional categorization of de novo transcriptome assembly of Vanilla planifolia Jacks. potentially points to a translational regulation during early stages of infection by Fusarium oxysporum f. sp. vanillae. BMC Genomics, 20 (1), 826.

Preprint

24 - Solano de la Cruz,M.T., Adame-Garcia,J., Gregorio-Jorge,J., Jimenez-Jacinto,V., Vega-Alvarado,L., Iglesias-Andreu,L., Escobar-Hernandez,E.E., Luna-Rodriguez,M.. Increase in ribosomal proteins activity: Translational reprogramming in Vanilla planifolia Jacks., against Fusarium infection. bioRxiv, Preprint posted June 05, 2019, 660860.

2018

Artículo

25 - Chowdhury-Paul, S., Pando-Robles, V., Jimenez-Jacinto, V., Segura, D., Espin, G., Nunez, C.. Proteomic analysis revealed proteins induced upon Azotobacter vinelandii encystment. Journal of Proteomics, 181, 47-59.

Artículo

26 - Sanchez-Pozos, K., Ortiz-Lopez, M.G., Pena-Espinoza, B.I., Granados-Silvestre, M.A., Jimenez-Jacinto, V., Verleyen, J., Tekola-Ayele, F., Sanchez-Flores, A., Menjivar, M.. Whole-exome sequencing in maya indigenous families: variant in PPP1R3A is associated with type 2 diabetes. Molecular Genetics and Genomics, 293 (5), 1205-1216.

2017

Artículo

27 - Olvera, A., Martyniuk, C.J., Buisine, N., Jimenez-Jacinto, V., Sanchez-Flores, A., Sachs, L.M., Orozco, A.. Differential transcriptome regulation by 3,5-T2 and 3',3,5-T3 in brain and liver uncovers novel roles for thyroid hormones in tilapia. Scientific Reports, 7 (1), 15043.

Divulgación

28 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco. Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM, 8, 29-32.

2016

Artículo

29 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors. Fems Microbiology Letters, 363 (17), fnw175.

2015

Nacional

30 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K.. Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014. 1269-1276, 3, Mexico D.F..

2013

Artículo

31 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J.. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Research, 41 (D1), D203-D213.

2011

Artículo

32 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J.. RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units). Nucleic Acids Research, 39 (Suppl 1), D98-D105.

2010

Artículo

33 - Demir,E., Cary,M.P., Paley,S., Fukuda,K., Lemer,C., Vastrik,I., Wu,G., D'Eustachio,P., Schaefer,C., Luciano,J., Schacherer,F., Martinez-Flores,I., Hu,Z., Jimenez-Jacinto,V., Joshi-Tope,G., Kandasamy,K., Lopez-Fuentes,A.C., Mi,H., Pichler,E., Rodchenkov,I., Splendiani,A., Tkachev,S., Zucker,J., Gopinath,G., Rajasimha,H., Ramakrishnan,R., Shah,I., Syed,M., Anwar,N., Babur,O., Blinov,M., Brauner,E., Corwin,D., Donaldson,S., Gibbons,F., Goldberg,R., Hornbeck,P., Luna,A., Murray-Rust,P., Neumann,E., Reubenacker,O., Samwald,M., van Iersel,M., Wimalaratne,S., Allen,K., Braun,B., Whirl-Carrillo,M., Cheung,K.H., Dahlquist,K., Finney,A., Gillespie,M., Glass,E., Gong,L., Haw,R., Honig,M., Hubaut,O., Kane,D., Krupa,S., Kutmon,M., Leonard,J., Marks,D., Merberg,D., Petri,V., Pico,A., Ravenscroft,D., Ren,L., Shah,N., Sunshine,M., Tang,R., Whaley,R., Letovksy,S., Buetow,K.H., Rzhetsky,A., Schachter,V., Sobral,B.S., Dogrusoz,U., McWeeney,S., Aladjem,M., Birney,E., Collado-Vides,J., Goto,S., Hucka,M., Le Novere,N., Maltsev,N., Pandey,A., Thomas,P., Wingender,E., Karp,P.D., Sander,C., Bader,G.D.. The BioPAX community standard for pathway data sharing. Nature Biotechnology, 28 (9), 935-942 (corrigendum vol 30 p 365 2012). *

Artículo

34 - Martinez-Flores,I., Jimenez-Jacinto,V., Lopez-Fuentes,A., Collado-Vides,J.. Expanding BioPAX format by integrating Gene Regulation. EMBnet.journal, 16 (1), 39-43. *

2009

Artículo

35 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E.. Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli. PLoS ONE, 4 (10), e7526.

2003

Artículo

36 - Martinez-Antonio,A., Salgado,H., Gama-Castro,S., Gutierrez-Rios,R.M., Jimenez-Jacinto,V., Collado-Vides,J.. Environmental conditions and transcriptional regulation in Escherichia coli: A physiological integrative approach. Biotechnology and Bioengineering, 84 (7), 743-749. *

Unidad de Secuencia Masiva y Bioinformática

veronica.jimenez@ibt.unam.mx

Laboratorio +52 (777) 329-1777 ext 38151.
desde la CDMX 562-27777 ext 38151
red UNAM 38151