M.C. Karel Johan Estrada Guerra
Técnico Académico
Total de publicaciones: 25
- Tipo
- Fecha
Artículo
1 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B. (2023). Babesia duncani multi-omics identifies virulence factors and drug targets.
Nature Microbiology,
8 (5),
845?859.
Artículo
2 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P. (2022). The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis.
Frontiers in Cellular and Infection Microbiology,
12,
876839.
Artículo
3 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I (2022). Association of Gut Microbiota with Dietary-dependent Childhood Obesity.
Archives of Medical Research,
53 (4),
407-415.
Artículo
4 - Santana,F.L., Estrada,K., Alford,M.A., Wu,B.C., Dostert,M., Pedraz,L., Akhoundsadegh,N., Kalsi,P., Haney,E.F., Straus,S.K., Corzo,G., Hancock,R.E.W. (2022). Novel Alligator Cathelicidin As-CATH8 Demonstrates Anti-Infective Activity against Clinically Relevant and Crocodylian Bacterial Pathogens.
Antibiotics (Basel),
11 (11),
1603.
Artículo
5 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C. (2021). Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease.
Plant Disease,
105 (9).
Revision
6 - Santana,F.L., Estrada,K., Ortiz,E., Corzo,G. (2021). Reptilian beta-defensins: expanding the repertoire of known crocodylian peptides.
Peptides,
136,
170473.
Artículo
7 - Santana,F.L., Arenas,I., Haney,E.F., Estrada,K., Hancock,R.E.W., Corzo,G. (2021). Identification of a crocodylian ×ý-defensin variant from Alligator mississippiensis with antimicrobial and antibiofilm activity.
Peptides,
141,
170549.
Artículo
8 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S. (2020). Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales).
Genes (Basel),
11 (7),
830.
Artículo
9 - Narvaez-Barragan,D.A., de Sandozequi,A., Rodriguez,M., Estrada,K., Tovar-Herrera,O.E., Martinez-Anaya,C. (2020). Analysis of two Mexican Pectobacterium brasiliense strains reveals an inverted relationship between c-di-GMP levels with exopolysaccharide production and swarming motility.
Microbiological Research,
235,
126427.
Artículo
10 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E. (2019). Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes.
PLoS Neglected Tropical Diseases,
13 (8),
e0007680.
Artículo
11 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S. (2019). De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales).
Plants (Basel),
8 (10),
392.
Artículo
12 - Taboada, B., Estrada, K., Ciria, R., Merino, E. (2018). Operon-mapper: A Web Server for Precise Operon Identification in Bacterial and Archaeal Genomes.
Bioinformatics,
34 (23),
4118?4120.
Artículo
13 - Adalid-Peralta, L., Rosas, G., Arce-Sillas, A., Bobes, R.J., Cardenas, G., Hernandez, M., Trejo, C., Meneses, G., Hernandez, B., Estrada, K., Fleury, A., Laclette, J.P., Larralde, C., Sciutto, E., Fragoso, G. (2017). Effect of Transforming Growth Factor-beta upon Taenia solium and Taenia crassiceps Cysticerci.
Scientific Reports,
7 (1),
12345.
Artículo
14 - Bobes, R.J., Navarrete-Perea, J., Ochoa-Leyva, A., Anaya, V.H., Hernandez, M., Cervantes-Torres, J., Estrada, K., Sanchez-Lopez, F., Soberon, X., Rosas, G., Maroni-Nunes C., Garcia-Varela, M., Sotelo-Mundo, R.R., Lopez-Zavala, A.A., Gevorkian, G., Acero, G., Laclette, J.P., Fragoso, G., Sciutto, E. (2017). Experimental and theoretical approaches to investigate the immunogenicity of Taenia solium-derived KE7 antigen.
Infection and Immunity,
85,
e00395-17.
Artículo
15 - Bedoya-Lopez,A., Estrada,K., Sanchez-Flores,A., Ramirez,O.T., Altamirano,C., Segovia,L., Miranda-Rios,J., Trujillo-Roldan,M.A., Valdez-Cruz,N.A. (2016). Effect of Temperature Downshift on the Transcriptomic Responses of Chinese Hamster Ovary Cells Using Recombinant Human Tissue Plasminogen Activator Production Culture.
PLoS ONE,
11 (3),
e0151529.
Artículo
16 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A. (2016). Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico.
Genome Announcements,
4 (2).
Artículo
17 - Calva,E., Silva,C., Zaidi,M.B., Sanchez-Flores,A., Estrada,K., Silva,G.G., Soto-Jimenez,L.M., Wiesner,M., Fernandez-Mora,M., Edwards,R.A., Vinuesa,P. (2015). Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype.
Genome Announcements,
3 (3),
e00663-15.
Artículo
18 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D. (2015). Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions.
G3: Genes, Genomes, Genetics,
5 (9),
1805-1814.
Artículo
19 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E. (2014). High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis.
Genome Announcements,
2 (6).
Revisión
20 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A. (2014). GARM: Genome Assembly, Reconciliation and Merging pipeline.
Current Topics in Medicinal Chemistry,
14 (3),
418-424.
Artículo
21 - Diaz-Masmela,Y., Fragoso,G., Ambrosio,J.R., Mendoza-Hernandez,G., Rosas,G., Estrada,K., Carrero,J.C., Sciutto,E., Laclette,J.P., Bobes,R.J. (2013). Immunodiagnosis of porcine cysticercosis: Identification of candidate antigens through immunoproteomics.
Veterinary Journal,
198 (3),
656-660.
Artículo
22 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A. (2013). The genomes of four tapeworm species reveal adaptations to parasitism.
Nature,
496 (7443),
57-63.
Preprint
23 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C. (2022). Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa.
bioRxiv,
Preprint posted May 09.
Divulgación
24 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A. (2017). El metagenoma del taco.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
8,
29-32.
25 - Estrada Guerra, Karel Johan (2017). Identificación in silico de elementos de regulación en secuencias de organismos bacterianos .
Instituto de Investigacion en Ciencias Basicas y Aplicadas,
UAEM.
*
Asesor: Merino Perez, Enrique
Artículo
26 - Singh,P., Lonardi,S., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Ciampossin,L., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Estrada,K., Sanchez-Flores,A., Montero,E., Harb,O.S., Le Roch,K.G., Mamoun,C.B.. Babesia duncani multi-omics identifies virulence factors and drug targets.
Nature Microbiology,
8 (5),
845?859.
Artículo
27 - Bobes,R.J., Estrada,K., Rios-Valencia,D.G., Calderon-Gallegos,A., de la Torre,P., Carrero,J.C., Sanchez-Flores,A., Laclette,J.P.. The Genomes of Two Strains of Taenia crassiceps the Animal Model for the Study of Human Cysticercosis.
Frontiers in Cellular and Infection Microbiology,
12,
876839.
Artículo
28 - Orbe-Orihuela,Y.C., Godoy-Lozano,E.E., Lagunas-Martinez,A, Castaneda-Marquez,A.C, Murga-Garrido,S, Diaz-Benitez,C.E, Ochoa-Leyva,A., Cornejo-Granados,F, Cruz,M, Estrada,K, Bermudez-Morales,V.H., Sanchez-Flores,A., Burguete-Garcia,A.I. Association of Gut Microbiota with Dietary-dependent Childhood Obesity.
Archives of Medical Research,
53 (4),
407-415.
Artículo
29 - Santana,F.L., Estrada,K., Alford,M.A., Wu,B.C., Dostert,M., Pedraz,L., Akhoundsadegh,N., Kalsi,P., Haney,E.F., Straus,S.K., Corzo,G., Hancock,R.E.W.. Novel Alligator Cathelicidin As-CATH8 Demonstrates Anti-Infective Activity against Clinically Relevant and Crocodylian Bacterial Pathogens.
Antibiotics (Basel),
11 (11),
1603.
Preprint
30 - Lonardi,S., Singh,P., Liang,Q., Vydyam,P., Khabirova,E., Fang,T., Gihaz,S., Thekkiniath,J., Munshi,M., Abel,S., Batugedara,G., Gupta,M., Lu,X.M., Lenz,T., Chakravarty,S., Cornillot,E., Hu,Y., Ma,W., Gonzalez,L.M., Sanchez,S., Sanchez-Flores,A., Estrada,K., Harb,O.S., Le Roch,K.G., Ben Mamoun,C.. Decoding The Nuclear Genome of The Human Pathogen Babesia duncani Shed Light on its Virulence, Drug Susceptibility and Evolution among Apicomplexa.
bioRxiv,
Preprint posted May 09.
Artículo
31 - Fajardo-Rebollar,E., Estrada,K., Grande,R., Ek Ramos,M.J., Ruiz-Vargas,G., Villegas-Torres,O.G., Juarez,A., Sanchez-Flores,A., Diaz-Camino,C.. Bacterial and fungal microbiome profiling in chilhuacle negro chili (Capsicum annuum L.) associated with fruit rot disease.
Plant Disease,
105 (9).
Revision
32 - Santana,F.L., Estrada,K., Ortiz,E., Corzo,G.. Reptilian beta-defensins: expanding the repertoire of known crocodylian peptides.
Peptides,
136,
170473.
Artículo
33 - Santana,F.L., Arenas,I., Haney,E.F., Estrada,K., Hancock,R.E.W., Corzo,G.. Identification of a crocodylian ×ý-defensin variant from Alligator mississippiensis with antimicrobial and antibiofilm activity.
Peptides,
141,
170549.
Artículo
34 - Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S., Solorzano,S.. Identification of High Molecular Variation Loci in Complete Chloroplast Genomes of Mammillaria (Cactaceae, Caryophyllales).
Genes (Basel),
11 (7),
830.
Artículo
35 - Narvaez-Barragan,D.A., de Sandozequi,A., Rodriguez,M., Estrada,K., Tovar-Herrera,O.E., Martinez-Anaya,C.. Analysis of two Mexican Pectobacterium brasiliense strains reveals an inverted relationship between c-di-GMP levels with exopolysaccharide production and swarming motility.
Microbiological Research,
235,
126427.
Artículo
36 - Gonzalez,L.M., Estrada,K., Grande,R., Jimenez-Jacinto,V., Vega-Alvarado,L., Sevilla,E., Barrera,J., Cuesta,I., Zaballos,A., Bautista,J.M., Lobo,C.A., Sanchez-Flores,A., Montero,E.. Comparative and functional genomics of the protozoan parasite Babesia divergens highlighting the invasion and egress processes.
PLoS Neglected Tropical Diseases,
13 (8),
e0007680.
Artículo
37 - Solorzano,S., Chincoya,D.A., Sanchez-Flores,A., Estrada,K., Diaz-Velasquez,C.E., Gonzalez-Rodriguez,A., Vaca-Paniagua,F., Davila,P., Arias,S.. De Novo Assembly Discovered Novel Structures in Genome of Plastids and Revealed Divergent Inverted Repeats in Mammillaria (Cactaceae, Caryophyllales).
Plants (Basel),
8 (10),
392.
Artículo
38 - Taboada, B., Estrada, K., Ciria, R., Merino, E.. Operon-mapper: A Web Server for Precise Operon Identification in Bacterial and Archaeal Genomes.
Bioinformatics,
34 (23),
4118?4120.
Artículo
39 - Adalid-Peralta, L., Rosas, G., Arce-Sillas, A., Bobes, R.J., Cardenas, G., Hernandez, M., Trejo, C., Meneses, G., Hernandez, B., Estrada, K., Fleury, A., Laclette, J.P., Larralde, C., Sciutto, E., Fragoso, G.. Effect of Transforming Growth Factor-beta upon Taenia solium and Taenia crassiceps Cysticerci.
Scientific Reports,
7 (1),
12345.
Artículo
40 - Bobes, R.J., Navarrete-Perea, J., Ochoa-Leyva, A., Anaya, V.H., Hernandez, M., Cervantes-Torres, J., Estrada, K., Sanchez-Lopez, F., Soberon, X., Rosas, G., Maroni-Nunes C., Garcia-Varela, M., Sotelo-Mundo, R.R., Lopez-Zavala, A.A., Gevorkian, G., Acero, G., Laclette, J.P., Fragoso, G., Sciutto, E.. Experimental and theoretical approaches to investigate the immunogenicity of Taenia solium-derived KE7 antigen.
Infection and Immunity,
85,
e00395-17.
Divulgación
41 - Jimenez-Jacinto, V., Escobar-Zepeda, A., Godoy, E., Vega-Alvarado, L., Verleyen, J., Estrada, K., Sanchez-Flores, A.. El metagenoma del taco.
Biotecnología en Movimiento. Revista de divulgación del Instituto de Biotecnología de la UNAM,
8,
29-32.
42 - Estrada Guerra, Karel Johan. Identificación in silico de elementos de regulación en secuencias de organismos bacterianos .
Instituto de Investigacion en Ciencias Basicas y Aplicadas,
UAEM.
*
Asesor: Merino Perez, Enrique
Artículo
43 - Bedoya-Lopez,A., Estrada,K., Sanchez-Flores,A., Ramirez,O.T., Altamirano,C., Segovia,L., Miranda-Rios,J., Trujillo-Roldan,M.A., Valdez-Cruz,N.A.. Effect of Temperature Downshift on the Transcriptomic Responses of Chinese Hamster Ovary Cells Using Recombinant Human Tissue Plasminogen Activator Production Culture.
PLoS ONE,
11 (3),
e0151529.
Artículo
44 - Rodriguez-Anaya,L.Z., Gonzalez-Galaviz,J.R., Casillas-Hernandez,R., Lares-Villa,F., Estrada,K., Ibarra-Gamez,J.C., Sanchez-Flores,A.. Draft Genome Sequence of White Spot Syndrome Virus Isolated from Cultured Litopenaeus vannamei in Mexico.
Genome Announcements,
4 (2).
Artículo
45 - Calva,E., Silva,C., Zaidi,M.B., Sanchez-Flores,A., Estrada,K., Silva,G.G., Soto-Jimenez,L.M., Wiesner,M., Fernandez-Mora,M., Edwards,R.A., Vinuesa,P.. Complete Genome Sequencing of a Multidrug-Resistant and Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Genotype.
Genome Announcements,
3 (3),
e00663-15.
Artículo
46 - Velez,P., Alejandri-Ramirez,N.D., Gonzalez,M.C., Estrada,K.J., Sanchez-Flores,A., Dinkova,T.D.. Comparative Transcriptome Analysis of the Cosmopolitan Marine Fungus Corollospora maritima Under Two Physiological Conditions.
G3: Genes, Genomes, Genetics,
5 (9),
1805-1814.
Artículo
47 - Cuesta,I., Gonzalez,L.M., Estrada,K., Grande,R., Zaballos,A., Lobo,C.A., Barrera,J., Sanchez-Flores,A., Montero,E.. High-Quality Draft Genome Sequence of Babesia divergens, the Etiological Agent of Cattle and Human Babesiosis.
Genome Announcements,
2 (6).
Revisión
48 - Soto-Jimenez,L.M., Estrada,K., Berriman,M., Sanchez-Flores,A.. GARM: Genome Assembly, Reconciliation and Merging pipeline.
Current Topics in Medicinal Chemistry,
14 (3),
418-424.
Artículo
49 - Diaz-Masmela,Y., Fragoso,G., Ambrosio,J.R., Mendoza-Hernandez,G., Rosas,G., Estrada,K., Carrero,J.C., Sciutto,E., Laclette,J.P., Bobes,R.J.. Immunodiagnosis of porcine cysticercosis: Identification of candidate antigens through immunoproteomics.
Veterinary Journal,
198 (3),
656-660.
Artículo
50 - Tsai,I.J., Zarowiecki,M., Holroyd,N., Garciarrubio,A., Sanchez-Flores,A., Brooks,K.L., Tracey,A., Bobes,R.J., Fragoso,G., Sciutto,E., Aslett,M., Beasley,H., Bennett,H.M., Cai,Jianping, Camicia,F., Clark,R., Cucher,M., De Silva,N., Day,T.A., Deplazes,P., Estrada,K., Fernandez,C., Holland,P.W.H., Hou,Junling, Hu,Songnian, Huckvale,Thomas, Hung,S.S., Kamenetzky,L., Keane,J.A., Kiss,F., Koziol,U., Lambert,O., Liu,K., Luo,Xuenong, Luo,Yingfeng, Macchiaroli,N., Nichol,S., Paps,Jordi, Parkinson,J., Pouchkina-Stantcheva,N., Riddiford,N., Rosenzvit,M., Salinas,G., Wasmuth,James D., Zamanian,M., Zheng,Yadong, Cai,Xuepeng, Soberon,X., Olson,P.D., Laclette,J.P., Brehm,Klaus, Berriman,M., Ochoa-Leyva,A.. The genomes of four tapeworm species reveal adaptations to parasitism.
Nature,
496 (7443),
57-63.
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