Dr. Juan Enrique Morett Sanchez
Investigador Titular C Tiempo Completo
Bioinformática aplicada a las ciencias ómicas
Número de registros: 9
- Vencidos
- Regulación de la expresión genética a nivel global en bacterias, PRESUPUESTO UNAM, 2014 - 2020
- Estudios de regulación de la expresión genética a nivel global en escherichia coli y geobacter sulfurreducens utilizando estrategias de secuenciación masiva y herramientas bioinformáticas, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2012 - 2016
- Desarrollo de metodologías robustas para el mapeo global de sitios de inicio de la transcripción en escherichia coli y geobacter sulfurreducens mediante secuenciación masiva de extremos 5´trifosfato de los mrna, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2012 - 2014
- Mapeo global de sitios de inicio de transcripción en escherichia coli y otras bacterias por pirosecuenciación, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2009 - 2012
- Evolución de las actividades enzimáticas involucradas en la biosíntesis de biotina, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2008 - 2010
- Estudios estructurales de variantes de hema con actividad de biof obtenidas por evolución dirigida., DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 2004 - 2006
- Evolución de nuevas actividades enzimáticas: implementación de sistemas de selección eficientes para demostrar migración catalítica., CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 2002 - 2005
- Migración de actividad enzimática por medio de evolución dirigida en un sistema de selección muy sensible, DIRECCIÓN GENERAL DE ASUNTOS DEL PERSONAL ACADÉMICO/UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO, 1999 - 2002
- Análisis genético de las interacciones moleculares durante la iniciación de la transcripción de bacterias: modificación del factor transcripcional sigma-54, CONSEJO NACIONAL DE CIENCIA Y TECNOLOGÍA, 1997 - 1998
Nivel Investigador Emérito del SNII
Doctorado, en Bioquímica, Universidad de Sussex, Laboratorio de Fijacion de Nitrogeno
Maestría, en Investigacion Biomedica Basica, UNAM (1986)
Licenciatura, Investigacion Biomedica Basica, UNAM (1984)
- Graduados
1 - Aguilar Ordonez, Israel (2023). Caracterizacion genomica de 100 individuos nativos mexicanos por secuenciacion de genoma completo : aspectos demograficos e identificacion de variantes de interes biomedico.
Instituto de Biotecnologia,
Doctorado en Ciencias Biomedicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
2 - Aguilar Ordonez, Israel (2015). Diseno de metodologias de enriquecimiento con transcritos primarios para deteccion de sitios de inicio de la transcripcion en escherichia coli k12 : (tecnicas Capture y pHSwitch) .
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
3 - Riveros Mckay Aguilera, Fernando (2014). Uso de tecnologias para analisis bioinformatico de datos de secuenciacion masiva.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
4 - Sanchez Sanchez, Brenda Janice (2012). Estandarizacion de una metodologia para la identificacion de sitios de inicio de la transcripcion dependientes de s70, en escherichia coli k12, mediante mapeo transcripcional in vitro.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
5 - Pedraza Perez, Yagul (2010). Estudios cristalograficos de THIN de Thermotoga maritima, Pirococcus furiosus y Sulfolobus solfataricus, una probable enzima analoga a la tiamina fosfato sintasa de Escherichia coli.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
6 - Contreras Ferrat, Luis Gabriel (2009). Promiscuidad catalitica y adaptabilidad evolutiva : evolucion in vitro y reclutamiento contingente de un intermediario generalista en la ruta de biosintesis de la biotina.
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
7 - Dago Rodriguez, Angel Ernesto (2007). Aspectos moleculares del mecanismo de activacion transcripcional de los promotores dependientes de o54 : comunicacion funcional entre el motivo GAFTGA del activador y la Region I de o54 durante el inicio de la transcripcion .
Instituto de Biotecnologia,
Doctorado en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
8 - Torres Sosa, Christian (2006). Ampliacion de la especificidad de la enzima acido 7,8diaminopelargonico sintasa de E. coli, para demostrar la posible existencia de intermediarios no especificos .
Instituto de Biotecnologia,
Maestria en Ciencias Bioquimicas,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
9 - Juarez Lopez, Katy (2000). Caracterizacion del mecanismo de regulacion por oxigeno de la actividad de NifA de Bradyrhizobium japonicum .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
10 - Grande Cano, Ricardo Alfredo (2000). Aspectos moleculares de los mecanismos de expresion de promotores bacterianos sigma54 y sigma70 dependientes .
Instituto de Biotecnologia,
Doctorado en Ciencias (Bioquimica),
UNAM.
Asesor: Morett Sanchez, Juan Enrique
11 - Barrios Camacho, Humberto (1999). Analisis molecular de los sistemas de regulacion transcripcional que controlan la expresion del operon fixRnifA deBradyrhizobium japonicum /.
Instituto de Biotecnologia,
Doctorado en Investigacion Biomedica Basica,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
12 - Gonzalez Zuniga, Victor Manuel (1998). El mecanismo de activacion trascripcional a distancia en bacteria y la region de control positivo de NifA .
Instituto de Biotecnologia,
Doctorado en Biotecnologia,
UNAM.
13 - Davila Ramos, Sonia (1998). Analisis de la interaccion de NifA de R. meliloti con las repiones promotoras UAS (Upstream Activato (Sequences) de los genes nif mediante mutagenesis dirigida .
Instituto de Biotecnologia,
Maestria en Biotecnologia,
UNAM.
Asesor: Morett Sanchez, Juan Enrique
14 - Grande Cano, Ricardo Alfredo (1996). Mutagenesis oligo dirigida de la region promotora-10/ -35 de Operon fix RnifA de Bradyrhizobium japonicum .
Facultad de Ciencias,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Juan Enrique
15 - Davila Ramos, Sonia (1994). Filogenia y evolucion molecular de las proteinas regulatorias : Two component.
FES Iztacala,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Juan Enrique
16 - Barrios Camacho, Humberto (1994). Regulacion de la expresion del activador transcripcional NiFA en Bradyrhizobium japonicum .
Facultad de Ciencias,
Licenciatura en Biología,
UNAM.
*
Asesor: Morett Sanchez, Enrique
* Indica publicación con otra institución de adscripción
Total de publicaciones: 82
- Tipo
- Fecha
Artículo
17 - Cihan,M., Andrade-Navarro,M.A., Morett,E. (2025). Genomic variation of human microRNAs and its association with functional features.
Cellular and Molecular Life Sciences,
82 (1),
411.
Artículo
18 - Mier,P., Andrade-Navarro,M.A., Morett,E. (2025). Apparent differences between human and chimp proteomes are reduced when considering human population: Human specific variants are enriched in disordered and compositionally biased regions.
PLoS ONE,
20 (7),
e0328504.
Artículo
19 - Miron-Toruno,F., Morett,E., Aguilar-Ordonez,I., Reynolds,A.W. (2025). Genome-wide selection scans in Mexican Indigenous populations reveal recent signatures of pathogen and diet adaptation.
Genome Biology and Evolution,
17 (3),
evaf043.
Revisión
20 - Perez-Gonzalez,A.P., Aguilar-Ordonez,I., Caballero,N.A., Morett,E. (2025). Genetic and genomic insights of the Comcáac people.
Journal of Community Genetics,
16,
653?668.
Artículo
21 - Mier,P., Andrade-Navarro,M.A., Morett,E. (2024). Homorepeat variability within the human population.
NAR genomics and bioinformatics,
6 (2),
lqae053.
Revisión
22 - Aguilar-Ordonez,I., Guzman-Linares,J., Ballesteros-Villascan,J., Miron-Toruno,F., Perez-Gonzalez,A., Garcia-Lopez,J., Cruz-Lopez,F., Morett,E. (2022). A Tale of Native American Whole-Genome Sequencing and Other Technologies.
Diversity,
14 (8),
647.
Artículo
23 - Aguilar-Ordonez,I., Perez-Villatoro,F., Garcia-Ortiz,H., Barajas-Olmos,F., Ballesteros-Villascan,J., Gonzalez-Buenfil,R., Fresno,C., Garciarrubio,A., Fernandez-Lopez,J.C., Tovar,H., Hernandez-Lemus,E., Orozco,L., Soberon,X., Morett,E. (2021). Whole genome variation in 27 Mexican indigenous populations, demographic and biomedical insights.
PLoS ONE,
16 (4),
e0249773,
[correction May 25 2022].
Artículo
24 - Andrade,A., Hernandez-Eligio,A., Tirado,A.L., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2021). Specialization of the Reiterated Copies of the Heterodimeric Integration Host Factor Genes in Geobacter sulfurreducens.
Frontiers in Microbiology,
12,
626443.
Artículo
25 - Lara,P., Vega-Alvarado,L., Sahonero-Canavesi,D.X., Koenen,M., Villanueva,L., Riveros-McKay,F., Morett,E., Juarez,K. (2021). Transcriptome Analysis Reveals Cr(VI) Adaptation Mechanisms in Klebsiella sp. Strain AqSCr.
Frontiers in Microbiology,
12,
656589.
Artículo
26 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A. (2021). High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
Artículo
27 - Jasso-Chavez,R., Lira-Silva,E., Gonzalez-Sanchez,K., Larios-Serrato,V., Mendoza-Monzoy,D.L., Perez-Villatoro,F., Morett,E., Vega-Segura,A., Torres-Marquez,M.E., Zepeda-Rodriguez,A., Moreno-Sanchez,R. (2019). Marine Archaeon Methanosarcina acetivorans Enhances Polyphosphate Metabolism Under Persistent Cadmium Stress.
Frontiers in Microbiology,
10,
2432.
Artículo; Actas Paper
28 - Hernandez-Eligio, A., Andrade, A., Soto, L., Morett, E., Juarez, K. (2017). The unphosphorylated form of the PilR two-component system regulates pilA gene expression in Geobacter sulfurreducens.
Environmental Science and Pollution Research,
24 (33),
25693-25701.
Artículo; Actas Paper
29 - Lara, P., Morett, E., Juarez, K. (2017). Acetate biostimulation as an effective treatment for cleaning up alkaline soil highly contaminated with Cr(VI).
Environmental Science and Pollution Research,
24 (33),
25513-25521.
Artículo
30 - Romero-Hidalgo, S., Ochoa-Leyva, A., Garciarrubio, A., Acuna-Alonzo, V., Antunez-Arguelles, E., Balcazar-Quintero, M., Barquera-Lozano, R., Carnevale, A., Cornejo-Granados, F., Fernandez-Lopez, J.C., Garcia-Herrera, R., Garcia-Ortiz, H., Granados-Silvestre, A., Granados, J., Guerrero-Romero, F., Hernandez-Lemus, E., Leon-Mimila, P., Macin-Perez, G., Martinez-Hernandez, A., Menjivar, M., Morett, E., Orozco, L., Ortiz-Lopez, G., Perez-Villatoro, F., Rivera-Morales, J., Riveros-McKay, F., Villalobos-Comparan, M., Villamil-Ramirez, H., Villarreal-Molina, T., Canizales-Quinteros, S., Soberon, X. (2017). Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing.
Nature Communications,
8 (1),
1005.
Artículo
31 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K. (2016). Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Artículo
32 - Gallarato,L.A., Sanchez,D.G., Olvera,L., Primo,E.D., Garrido,M.N., Beassoni,P.R., Morett,E., Lisa,A.T. (2014). Exopolyphosphatase of Pseudomonas aeruginosa is essential for the production of virulence factors and its expression is controlled by NtrC and PhoB, acting at two interspaced promoters.
Microbiology,
160 (2),
406-417.
Artículo
33 - Meysman,P., Collado-Vides,J., Morett,E., Viola,R., Engelen,K., Laukens,K. (2014). Structural properties of prokaryotic promoter regions correlate with functional features.
PLoS ONE,
9 (2),
e88717.
Artículo
34 - Balderas-Martinez,Y.I., Savageau,M., Salgado,H., Perez-Rueda,E., Morett,E., Collado-Vides,J. (2013). Transcription Factors in Escherichia coli Prefer the Holo Conformation.
PLoS ONE,
8 (6),
e65723.
Artículo
35 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J. (2013). RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
36 - Weiss,V., Medina-Rivera,A., Huerta,A.M., Santos-Zavaleta,A., Salgado,H., Morett,E., Collado-Vides,J. (2013). Evidence classification of high-throughput protocols and confidence integration in RegulonDB.
Database (Oxford),
2013,
bas059.
Artículo
37 - Aguilar,C., Escalante,A., FLORES,N., de Anda,R., Riveros-McKay,F., Gosset,G., Morett,E., Bolivar,F. (2012). Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system.
BMC Genomics,
13 (1),
385.
Artículo
38 - Flores,H., Lin,S., Contreras-Ferrat,G., Cronan,J.E., Morett,E. (2012). Evolution of a new function in an esterase: simple amino acid substitutions enable the activity present in the larger paralog, BioH.
Protein Engineering Design & Selection,
25 (8),
387-395.
Artículo
39 - Gallego-Hernandez,A.L., Hernandez-Lucas,I., De la Cruz,M.A., Olvera,L., Morett,E., Medina-Aparicio,L., Ramirez-Trujillo,J.A., Vazquez,A., Fernandez-Mora,M., Calva,E. (2012). Transcriptional regulation of the assT-dsbL-dsbI gene cluster depends on LeuO, H-NS and specific growth conditions in Salmonella enterica serovar Typhi IMSS-1.
Journal of Bacteriology,
194 (9),
2254-2264.
Artículo
40 - Saab-Rincon,G., Olvera,L., Olvera,M., Rudino-Pinera,E., Benites,E., Soberon,X., Morett,E. (2012). Evolutionary Walk between (beta/alpha)(8) Barrels: Catalytic Migration from Triosephosphate Isomerase to Thiamin Phosphate Synthase.
Journal of Molecular Biology,
416 (2),
255-270.
Artículo
41 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J. (2011). RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
42 - Massimelli,M.J., Sanchez,D.G., Buchieri,M.V., Olvera,L., Beassoni,P.R., Schweizer,H.P., Morett,E., Lisa,A.T. (2011). Choline catabolism, sigma(54) factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene.
Microbiological Research,
166 (5),
380-390.
Revisión
43 - Collado-Vides,J., Salgado,H., Morett,E., Gama-Castro,S., Jimenez-Jacinto,V., Martinez-Flores,I., Medina-Rivera,A., Muniz-Rascado,L., Peralta-Gil,M., Santos-Zavaleta,A. (2009). Bioinformatics resources for the study of gene regulation in bacteria.
Journal of Bacteriology,
191 (1),
23-31.
Artículo
44 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E. (2009). Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
Artículo
46 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J. (2008). RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
47 - Morett,E., Saab-Rincon,G., Olvera,L., Olvera,M., Flores,H., Grande,R. (2008). Sensitive Genome-Wide Screen for Low Secondary Enzymatic Activities: The YjbQ Family Shows Thiamin Phosphate Synthase Activity.
Journal of Molecular Biology,
376 (3),
839-853.
Artículo
48 - Watanabe,R.L., Morett,E., Vallejo,E.E. (2008). Inferring modules of functionally interacting proteins using the Bond Energy Algorithm.
BMC Bioinformatics,
9 (1),
285.
Artículo
49 - Dago,A.E., Wigneshweraraj,S.R., Buck,M., Morett,E. (2007). A role for the conserved GAFTGA motif of AAA transcriptional activators in sensing promoter DNA conformation.
Journal of Biological Chemistry,
282 (2),
1087-1097.
Artículo
50 - Hernandez-Urzua,E., Zamorano-Sanchez,D.S., Ponce-Coria,J., Morett,E., Grogan,S., Poole,R.K., Membrillo-Hernandez,J. (2007). Multiple regulators of the Flavohaemoglobin (hmp) gene of Salmonella enterica serovar Typhimurium include RamA, a transcriptional regulator conferring the multidrug resistance phenotype.
Archives of Microbiology,
187 (1),
67-77.
Artículo; Actas Paper
51 - Aguilar-Diaz,H., Bobes,R.J., Carrero,J.C., Camacho-Carranza,R., Cervantes,C., Cevallos,M.A., Davila,G., Rodriguez-Dorantes,M., Escobedo,G., Fernandez,J.L., Fragoso,G., Gaytan,P., Garciarrubio,A., Gonzalez,V.M., Gonzalez,L., Jose,M.V., Jimenez,L., Laclette,J.P., Landa,A., Larralde,C., Morales-Montor,J., Morett,E., Ostoa-Saloma,P., Sciutto,E., Santamaria,R.I., Soberon,X., de la Torre P., Valdes,V., Yanez,J. (2006). The genome project of Taenia solium.
Parasitology International,
55 (Suppl),
S127-S130.
Artículo
52 - Avonce,N., Mendoza-Vargas,A., Morett,E., Iturriaga,G. (2006). Insights on the evolution of trehalose biosynthesis.
BMC Evolutionary Biology,
6 (1),
109.
Artículo
53 - Huerta,A.M., Francino,M.P., Morett,E., Collado-Vides,J. (2006). Selection for Unequal Densities of sigma(70) Promoter-Like Signals in Different Regions of Large Bacterial Genomes.
PLoS Genetics,
2 (11),
e185.
Artículo
54 - Gaytan,P., Yanez,J., Grande,R., Morett,E., Soberon,X. (2005). Improving random mutagenesis by purification of the oligonucleotide variants.
Combinatorial Chemistry & High Throughput Screening,
8 (6),
537-544.
Artículo
55 - Bordes,P., Wigneshweraraj,S.R., Chaney,M., Dago,A.E., Morett,E., Buck,M. (2004). Communication between Esigma, promoter DNA and the conserved threonine residue in the GAFTGA motif of the PspF sigma-dependent activator during transcription activation.
Molecular Microbiology,
54 (2),
489-506.
Artículo
56 - Ciria,R., Abreu-Goodger,C., Morett,E., Merino,E. (2004). GeConT: gene context analysis.
Bioinformatics,
20 (14),
2307-2308.
Artículo
57 - Morett,E., Garciarrubio,A. (2004). Shuffled: a software suite that assists the analysis of recombinant products resulting from DNA shuffling.
Biotechniques,
37 (3),
354-+.
Artículo
58 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P. (2003). Systematic discovery of analogous enzymes in thiamin biosynthesis.
Nature Biotechnology,
21 (7),
790-795.
Artículo; Actas
59 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P. (2002). Discovery of Analogous Enzymes in Thiamin Biosynthesis by Anticorrelation.
Genome Informatics,
13,
365-366.
Artículo
60 - Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P., Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E., Morett,E., Buck,M. (2001). Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action.
Genes and Development,
15 (17),
2282-2294.
Artículo
61 - Juarez,K., Flores,H., Davila,S., Olvera,L., Gonzalez,V., Morett,E. (2000). Reciprocal domain evolution within a transactivator in a restricted sequence space.
Proceedings of the National Academy of Sciences of the United States of America,
97 (7),
3314-3318.
Revisión
62 - Barrios,H., Valderrama,B., Morett,E. (1999). Compilation and analysis of sigma(54)-dependent promoter sequences.
Nucleic Acids Research,
27 (22),
4305-4313.
Artículo
63 - Grande,R.A., Valderrama,B., Morett,E. (1999). Suppression analysis of positive control mutants of NifA reveals two overlapping promoters for Klebsiella pneumoniae rpoN.
Journal of Molecular Biology,
294 (2),
291-298.
Artículo
64 - Morett,E., Bork,P. (1999). A novel transactivation domain in parkin.
Trends in Biochemical Sciences,
24 (6),
229-231.
Artículo
65 - Barrios,H., Grande,R., Olvera,L., Morett,E. (1998). In vivo genomic footprinting analysis reveals that the complex Bradyrhizobium japonicum fixRnifA promoter region is differently occupied by two distinct RNA polymerase holoenzymes.
Proceedings of the National Academy of Sciences of the United States of America,
95 (3),
1014-1019.
Artículo
66 - Gonzalez,V., Olvera,L., Soberon,X., Morett,E. (1998). In vivo studies on the positive control function of NifA: a conserved hydrophobic amino acid patch at the central domain involved in transcriptional activation.
Molecular Microbiology,
28 (1),
55-67.
Artículo
67 - Morett,E., Bork,P. (1998). Evolution of new protein function: recombinational enhancer Fis originated by horizontal gene transfer from the transcriptional regulator NtrC.
FEBS Letters,
433 (1-2),
108-112.
Artículo
68 - Del Rio,G., Morett,E., Soberon,X. (1997). Did cyclodextrin glycosyltransferases evolve from alpha-amylases?.
FEBS Letters,
416 (2),
221-224.
Artículo
69 - Osuna,J., Soberon,X., Morett,E. (1997). A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.
Protein Science,
6 (3),
543-555.
Artículo
70 - Valderrama,B., Davalos,A., Girard,L., Morett,E., Mora,J. (1996). Regulatory proteins and cis-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes.
Journal of Bacteriology,
178 (11),
3119-3126.
Artículo
71 - Barrios,H., Fischer,H.M., Hennecke,H., Morett,E. (1995). Overlapping promoters for two different RNA polymerase holoenzymes control Bradyrhizobium japonicum nifA expression.
Journal of Bacteriology,
177 (7),
1760-1765.
*
Revisión
72 - Morett,E., Segovia,L. (1993). The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains.
Journal of Bacteriology,
175 (19),
6067-6074.
*
Artículo
73 - Morett,E., Fischer,H.M., Hennecke,H. (1991). Influence of oxygen on DNA binding, positive control, and stability of the Bradyrhizobium japonicum NifA regulatory protein.
Journal of Bacteriology,
173 (11),
3478-3487.
*
Artículo
74 - Cannon,W.V., Kreutzer,R., Kent,H.M., Morett,E., Buck,M. (1990). Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites.
Nucleic Acids Research,
18 (7),
1693-1701.
*
Artículo
75 - Morett,E., Kreutzer,R., Cannon,W., Buck,M. (1990). The influence of the Klebsiella pneumoniae regulatory gene nifL upon the transcriptional activator protein NifA.
Molecular Microbiology,
4 (8),
1253-1258.
*
Artículo
76 - Morett,E., Buck,M. (1989). In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex.
Journal of Molecular Biology,
210 (1),
65-77.
*
Artículo
77 - Morett,E., Moreno,S., Espin,G. (1988). Transcription analysis of the three nifH genes of Rhizobium phaseoli with gene fusions.
MGG Molecular & General Genetics,
213 (2-3),
499-504.
*
Artículo
78 - Morett,E., Cannon,W., Buck,M. (1988). The DNA-binding domain of the transcriptional activator protein NifA resides in its carboxy terminus, recognises the upstream activator sequences of nif promoters and can be separated from the positive control function of NifA.
Nucleic Acids Research,
16 (24),
11469-11488.
*
Artículo
79 - Morett,E., Buck,M. (1988). NifA-dependent in vivo protection demonstrates that the upstream activator sequence of nif promoters is a protein binding site.
Proceedings of the National Academy of Sciences of the United States of America,
85 (24),
9401-9405.
*
Note
80 - Romero,D., Singleton,P.W., Segovia,L., Morett,E., Benbohlool,B., Palacios,R., Davila,G. (1988). Effect of Naturally Occurring nif Reiterations on Symbiotic Effectiveness in Rhizobium phaseoli.
Applied and Environmental Microbiology,
54 (3),
848-850.
*
Note
81 - Calderon,J., Morett,E., Mora,J. (1985). Omega-amidase pathway in the degradation of glutamine in Neurospora crassa.
Journal of Bacteriology,
161 (2),
807-809.
*
Artículo
82 - Morett,E., Moreno,S., Espin,G. (1985). Impaired nitrogen fixation and glutamine synthesis in methionine sulfoximine sensitive (MSs) mutants of Rhizobium phaseoli.
MGG Molecular & General Genetics,
200 (2),
229-234.
*
Nacional
83 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K. (2015). Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Nacional
84 - Hernandez-Eligio,J.A., Soto,L., Andrade,A., Olvera,L., Davila,S., Morett,E., Juarez-Lopez,K. (2015). Caracterización del sistema de dos componentes PilS/PilR y su mecanismo de regulación sobre el gen pilA en geobacter sulfurreducens. Environmental Biotechnology and Engineering-2014.
1277-1287,
3,
Mexico,D.F..
Internacional
85 - Tapia,J.J., Morett,E., Vallejo,E.E. (2009). A clustering genetic algorithm for genomic data mining. Foundations of Computational Intelligence .
Studies in Computational Intelligence,
249-275,
4,
Berlin, Heidelberg: Springer.
Memoria in extenso
86 - Tapia,J.J., Vallejo,E.E., Morett,E. (2009). MOCEA: A multi-objective clustering evolutionary algorithm for inferring protein-protein functional interactions. Proceedings of the 11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009.
1793-1794.
Memoria in extenso
87 - Molina-Lozano,H., Vallejo-Clemente,E.E., Morett-Sanchez,J.E. (2008). DNA sequence analysis using fuzzy grammars. IEEE International Conference on Fuzzy Systems.
1915-1921.
Memoria in extenso
88 - Martínez,M., Vallejo,E.E., Morett,E. (2007). Ancestral DNA sequence reconstruction using recursive genetic algorithms. Lecture Notes in Computer Science, vol 4828 cap 4.
390-400.
Memoria in extenso
89 - Fernandez,J.C., Vallejo,E.E., Morett,E. (2006). Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles. Computational Intelligence and Bioinformatics and Computational Biology, 2006. CIBCB '06. 2006 IEEE Symposium on.
1-8.
Memoria in extenso
90 - Watanabe,R., Vallejo,E.E., Morett,E. (2006). Inferring functional coupling of proteins using the Evolutionary Bond Energy Algorithm. Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06.
400-405.
Internacional
Nacional
92 - Morett,E. (2001). Genetic regulation of nitrogen fixation: from ammonia ssimilation to protein evolution. Nitrogen Fixation Research Center XX Anniversary.
180-183.
Internacional
93 - Morett,E., Juarez,K., Davila,S., Olvera,L., Caro,S., Flores,H. (1998). Enhancing Nitrogen Fixation Gene Expression by Modifying the DNA-Binding Function of Rhizobium meliloti NifA. Biological Nitrogen Fixation for the 21st Century.
Dordrecht, Holanda: Kluwer Academic Publishers.
Nacional divulgación
94 - Morett-Sanchez,J.E. (2025). Racismo vs genómica: ¿Es científicamente válido hablar de razas en la población humana?.
Biotecnología en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
10 (39).
Preprint
95 - Miron-Toruno,M.F., Morett,E., Aguilar-Ordonez,I., Reynolds,A.W. (2024). Whole genome sequencing of 76 Mexican Indigenous reveals recent selection signatures linked to pathogens and diet adaptation.
bioRxiv,
Preprint posted July 29.
nacional divulgación
96 - Aguilar,I., Guzman,J., Miron,F., Morett,E. (2021). Conociendo el Genoma Indígena Mexicano: el proyecto 100G-MX.
Biotecnología en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
26,
8-15.
97 - Morett Sanchez, Juan Enrique (1987). - Analisis transcripcional de los genes reiterados de la nitrogenasa reductasa en Rhizobium phaseoli / tesis que para obtener el grado de presenta Juan Enrique Morett Sanchez ; asesor Elda Guadalupe Espin Ocampo.
CIFN,
Maestria en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
98 - Morett Sanchez, Juan Enrique (1984). Obtencion y analisis de mutaciones que afectan la actividad de la nitrogenasa y de un glutamino sintetasa en rhizobium phaseoli.
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
Artículo
99 - Cihan,M., Andrade-Navarro,M.A., Morett,E.. Genomic variation of human microRNAs and its association with functional features.
Cellular and Molecular Life Sciences,
82 (1),
411.
Artículo
100 - Mier,P., Andrade-Navarro,M.A., Morett,E.. Apparent differences between human and chimp proteomes are reduced when considering human population: Human specific variants are enriched in disordered and compositionally biased regions.
PLoS ONE,
20 (7),
e0328504.
Artículo
101 - Miron-Toruno,F., Morett,E., Aguilar-Ordonez,I., Reynolds,A.W.. Genome-wide selection scans in Mexican Indigenous populations reveal recent signatures of pathogen and diet adaptation.
Genome Biology and Evolution,
17 (3),
evaf043.
Revisión
102 - Perez-Gonzalez,A.P., Aguilar-Ordonez,I., Caballero,N.A., Morett,E.. Genetic and genomic insights of the Comcáac people.
Journal of Community Genetics,
16,
653?668.
Nacional divulgación
103 - Morett-Sanchez,J.E.. Racismo vs genómica: ¿Es científicamente válido hablar de razas en la población humana?.
Biotecnología en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
10 (39).
Artículo
104 - Mier,P., Andrade-Navarro,M.A., Morett,E.. Homorepeat variability within the human population.
NAR genomics and bioinformatics,
6 (2),
lqae053.
Preprint
105 - Miron-Toruno,M.F., Morett,E., Aguilar-Ordonez,I., Reynolds,A.W.. Whole genome sequencing of 76 Mexican Indigenous reveals recent selection signatures linked to pathogens and diet adaptation.
bioRxiv,
Preprint posted July 29.
Revisión
106 - Aguilar-Ordonez,I., Guzman-Linares,J., Ballesteros-Villascan,J., Miron-Toruno,F., Perez-Gonzalez,A., Garcia-Lopez,J., Cruz-Lopez,F., Morett,E.. A Tale of Native American Whole-Genome Sequencing and Other Technologies.
Diversity,
14 (8),
647.
Artículo
107 - Aguilar-Ordonez,I., Perez-Villatoro,F., Garcia-Ortiz,H., Barajas-Olmos,F., Ballesteros-Villascan,J., Gonzalez-Buenfil,R., Fresno,C., Garciarrubio,A., Fernandez-Lopez,J.C., Tovar,H., Hernandez-Lemus,E., Orozco,L., Soberon,X., Morett,E.. Whole genome variation in 27 Mexican indigenous populations, demographic and biomedical insights.
PLoS ONE,
16 (4),
e0249773,
[correction May 25 2022].
Artículo
108 - Andrade,A., Hernandez-Eligio,A., Tirado,A.L., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Specialization of the Reiterated Copies of the Heterodimeric Integration Host Factor Genes in Geobacter sulfurreducens.
Frontiers in Microbiology,
12,
626443.
Artículo
109 - Lara,P., Vega-Alvarado,L., Sahonero-Canavesi,D.X., Koenen,M., Villanueva,L., Riveros-McKay,F., Morett,E., Juarez,K.. Transcriptome Analysis Reveals Cr(VI) Adaptation Mechanisms in Klebsiella sp. Strain AqSCr.
Frontiers in Microbiology,
12,
656589.
Artículo
110 - Vichi,J., Salazar,E., Jimenez-Jacinto,V., Olvera-Rodriguez,L., Grande,R., Dantan-Gonzalez,E., Morett,E., Hernandez-Mendoza,A.. High-throughput transcriptome sequencing and comparative analysis of Escherichia coli and Schizosaccharomyces pombe in respiratory and fermentative growth.
PLoS ONE,
16 (3),
e0248513.
nacional divulgación
111 - Aguilar,I., Guzman,J., Miron,F., Morett,E.. Conociendo el Genoma Indígena Mexicano: el proyecto 100G-MX.
Biotecnología en Movimiento.Revista de divulgación del Instituto de Biotecnología de la UNAM,
26,
8-15.
Artículo
112 - Jasso-Chavez,R., Lira-Silva,E., Gonzalez-Sanchez,K., Larios-Serrato,V., Mendoza-Monzoy,D.L., Perez-Villatoro,F., Morett,E., Vega-Segura,A., Torres-Marquez,M.E., Zepeda-Rodriguez,A., Moreno-Sanchez,R.. Marine Archaeon Methanosarcina acetivorans Enhances Polyphosphate Metabolism Under Persistent Cadmium Stress.
Frontiers in Microbiology,
10,
2432.
Artículo; Actas Paper
113 - Hernandez-Eligio, A., Andrade, A., Soto, L., Morett, E., Juarez, K.. The unphosphorylated form of the PilR two-component system regulates pilA gene expression in Geobacter sulfurreducens.
Environmental Science and Pollution Research,
24 (33),
25693-25701.
Artículo; Actas Paper
114 - Lara, P., Morett, E., Juarez, K.. Acetate biostimulation as an effective treatment for cleaning up alkaline soil highly contaminated with Cr(VI).
Environmental Science and Pollution Research,
24 (33),
25513-25521.
Artículo
115 - Romero-Hidalgo, S., Ochoa-Leyva, A., Garciarrubio, A., Acuna-Alonzo, V., Antunez-Arguelles, E., Balcazar-Quintero, M., Barquera-Lozano, R., Carnevale, A., Cornejo-Granados, F., Fernandez-Lopez, J.C., Garcia-Herrera, R., Garcia-Ortiz, H., Granados-Silvestre, A., Granados, J., Guerrero-Romero, F., Hernandez-Lemus, E., Leon-Mimila, P., Macin-Perez, G., Martinez-Hernandez, A., Menjivar, M., Morett, E., Orozco, L., Ortiz-Lopez, G., Perez-Villatoro, F., Rivera-Morales, J., Riveros-McKay, F., Villalobos-Comparan, M., Villamil-Ramirez, H., Villarreal-Molina, T., Canizales-Quinteros, S., Soberon, X.. Demographic history and biologically relevant genetic variation of Native Mexicans inferred from whole-genome sequencing.
Nature Communications,
8 (1),
1005.
Artículo
116 - Gonzalez,G., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Olvera,M., Morett,E., Juarez,K.. Global transcriptional start site mapping in Geobacter sulfurreducens during growth with two different electron acceptors.
Fems Microbiology Letters,
363 (17),
fnw175.
Nacional
117 - Gonzalez,G., Labastida,A., Jimenez,V., Vega,L., Olvera,M., Morett,E., Juarez,K.. Genes involved in electron transfer mechanism in g. Sulfurreducens. Environmental Biotechnology and Engineering-2014.
1269-1276,
3,
Mexico D.F..
Nacional
118 - Hernandez-Eligio,J.A., Soto,L., Andrade,A., Olvera,L., Davila,S., Morett,E., Juarez-Lopez,K.. Caracterización del sistema de dos componentes PilS/PilR y su mecanismo de regulación sobre el gen pilA en geobacter sulfurreducens. Environmental Biotechnology and Engineering-2014.
1277-1287,
3,
Mexico,D.F..
Artículo
119 - Gallarato,L.A., Sanchez,D.G., Olvera,L., Primo,E.D., Garrido,M.N., Beassoni,P.R., Morett,E., Lisa,A.T.. Exopolyphosphatase of Pseudomonas aeruginosa is essential for the production of virulence factors and its expression is controlled by NtrC and PhoB, acting at two interspaced promoters.
Microbiology,
160 (2),
406-417.
Artículo
120 - Meysman,P., Collado-Vides,J., Morett,E., Viola,R., Engelen,K., Laukens,K.. Structural properties of prokaryotic promoter regions correlate with functional features.
PLoS ONE,
9 (2),
e88717.
Artículo
121 - Balderas-Martinez,Y.I., Savageau,M., Salgado,H., Perez-Rueda,E., Morett,E., Collado-Vides,J.. Transcription Factors in Escherichia coli Prefer the Holo Conformation.
PLoS ONE,
8 (6),
e65723.
Artículo
122 - Salgado,H., Peralta-Gil,M., Gama-Castro,S., Santos-Zavaleta,A., Muniz-Rascado,L., Garcia-Sotelo,J.S., Weiss,V., Solano-Lira,H., Martinez-Flores,I., Medina-Rivera,A., Salgado-Osorio,G., Alquicira-Hernandez,S., Alquicira-Hernandez,K., Lopez-Fuentes,A., Porron-Sotelo,L., Huerta,A.M., Bonavides-Martinez,C., Balderas-Martinez,Y.I., Pannier,L., Olvera,M., Labastida,A., Jimenez-Jacinto,V., Vega-Alvarado,L., Del Moral-Chavez,V., Hernandez-Alvarez,A., Morett,E., Collado-Vides,J.. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more.
Nucleic Acids Research,
41 (D1),
D203-D213.
Artículo
123 - Weiss,V., Medina-Rivera,A., Huerta,A.M., Santos-Zavaleta,A., Salgado,H., Morett,E., Collado-Vides,J.. Evidence classification of high-throughput protocols and confidence integration in RegulonDB.
Database (Oxford),
2013,
bas059.
Artículo
124 - Aguilar,C., Escalante,A., FLORES,N., de Anda,R., Riveros-McKay,F., Gosset,G., Morett,E., Bolivar,F.. Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system.
BMC Genomics,
13 (1),
385.
Artículo
125 - Flores,H., Lin,S., Contreras-Ferrat,G., Cronan,J.E., Morett,E.. Evolution of a new function in an esterase: simple amino acid substitutions enable the activity present in the larger paralog, BioH.
Protein Engineering Design & Selection,
25 (8),
387-395.
Artículo
126 - Gallego-Hernandez,A.L., Hernandez-Lucas,I., De la Cruz,M.A., Olvera,L., Morett,E., Medina-Aparicio,L., Ramirez-Trujillo,J.A., Vazquez,A., Fernandez-Mora,M., Calva,E.. Transcriptional regulation of the assT-dsbL-dsbI gene cluster depends on LeuO, H-NS and specific growth conditions in Salmonella enterica serovar Typhi IMSS-1.
Journal of Bacteriology,
194 (9),
2254-2264.
Artículo
127 - Saab-Rincon,G., Olvera,L., Olvera,M., Rudino-Pinera,E., Benites,E., Soberon,X., Morett,E.. Evolutionary Walk between (beta/alpha)(8) Barrels: Catalytic Migration from Triosephosphate Isomerase to Thiamin Phosphate Synthase.
Journal of Molecular Biology,
416 (2),
255-270.
Artículo
128 - Gama-Castro,S., Salgado,H., Peralta-Gil,M., Santos-Zavaleta,A., Muniz-Rascado,L., Solano-Lira,H., Jimenez-Jacinto,V., Weiss,V., Garcia-Sotelo,J.S., Lopez-Fuentes,A., Porron-Sotelo,L., Alquicira-Hernandez,S., Medina-Rivera,A., Martinez-Flores,I., Alquicira-Hernandez,K., Martinez-Adame,R., Bonavides-Martinez,C., Miranda-Rios,J., Huerta,A.M., Mendoza-Vargas,A., Collado-Torres,L., Taboada,B., Vega-Alvarado,L., Olvera,M., Olvera,L., Grande,R., Morett,E., Collado-Vides,J.. RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units).
Nucleic Acids Research,
39 (Suppl 1),
D98-D105.
Artículo
129 - Massimelli,M.J., Sanchez,D.G., Buchieri,M.V., Olvera,L., Beassoni,P.R., Schweizer,H.P., Morett,E., Lisa,A.T.. Choline catabolism, sigma(54) factor and NtrC are required for the full expression of the Pseudomonas aeruginosa phosphorylcholine phosphatase gene.
Microbiological Research,
166 (5),
380-390.
Revisión
130 - Collado-Vides,J., Salgado,H., Morett,E., Gama-Castro,S., Jimenez-Jacinto,V., Martinez-Flores,I., Medina-Rivera,A., Muniz-Rascado,L., Peralta-Gil,M., Santos-Zavaleta,A.. Bioinformatics resources for the study of gene regulation in bacteria.
Journal of Bacteriology,
191 (1),
23-31.
Artículo
131 - Mendoza-Vargas,A., Olvera,L., Olvera,M., Grande,R., Vega-Alvarado,L., Taboada,B., Jimenez-Jacinto,V., Salgado,H., Juarez,K., Contreras-Moreira,B., Huerta,A.M., Collado-Vides,J., Morett,E.. Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli.
PLoS ONE,
4 (10),
e7526.
Artículo
132 - Olvera,L., Mendoza-Vargas,A., FLORES,N., Olvera,M., Sigala,J.C., Gosset,G., Morett,E., Bolivar,F.. Transcription Analysis of Central Metabolism Genes in Escherichia coli. Possible Roles of a38 in Their Expression, as a Response to Carbon Limitation.
PLoS ONE,
4 (10),
e7466.
Internacional
133 - Tapia,J.J., Morett,E., Vallejo,E.E.. A clustering genetic algorithm for genomic data mining. Foundations of Computational Intelligence .
Studies in Computational Intelligence,
249-275,
4,
Berlin, Heidelberg: Springer.
Memoria in extenso
134 - Tapia,J.J., Vallejo,E.E., Morett,E.. MOCEA: A multi-objective clustering evolutionary algorithm for inferring protein-protein functional interactions. Proceedings of the 11th Annual Genetic and Evolutionary Computation Conference, GECCO-2009.
1793-1794.
Artículo
135 - Gama-Castro,S., Jimenez-Jacinto,V., Peralta-Gil,M., Santos-Zavaleta,A., Penaloza-Spinola,M.I., Contreras-Moreira,B., Segura-Salazar,J., Muniz-Rascado,L., Martinez-Flores,I., Salgado,H., Bonavides-Martinez,C., Abreu-Goodger,C., Rodriguez-Penagos,C., Miranda-Rios,J., Morett,E., Merino,E., Huerta,A.M., Trevino-Quintanilla,L., Collado-Vides,J.. RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.
Nucleic Acids Research,
36 (Database issue),
D120-D124.
Artículo
136 - Morett,E., Saab-Rincon,G., Olvera,L., Olvera,M., Flores,H., Grande,R.. Sensitive Genome-Wide Screen for Low Secondary Enzymatic Activities: The YjbQ Family Shows Thiamin Phosphate Synthase Activity.
Journal of Molecular Biology,
376 (3),
839-853.
Artículo
137 - Watanabe,R.L., Morett,E., Vallejo,E.E.. Inferring modules of functionally interacting proteins using the Bond Energy Algorithm.
BMC Bioinformatics,
9 (1),
285.
Memoria in extenso
138 - Molina-Lozano,H., Vallejo-Clemente,E.E., Morett-Sanchez,J.E.. DNA sequence analysis using fuzzy grammars. IEEE International Conference on Fuzzy Systems.
1915-1921.
Artículo
139 - Dago,A.E., Wigneshweraraj,S.R., Buck,M., Morett,E.. A role for the conserved GAFTGA motif of AAA transcriptional activators in sensing promoter DNA conformation.
Journal of Biological Chemistry,
282 (2),
1087-1097.
Artículo
140 - Hernandez-Urzua,E., Zamorano-Sanchez,D.S., Ponce-Coria,J., Morett,E., Grogan,S., Poole,R.K., Membrillo-Hernandez,J.. Multiple regulators of the Flavohaemoglobin (hmp) gene of Salmonella enterica serovar Typhimurium include RamA, a transcriptional regulator conferring the multidrug resistance phenotype.
Archives of Microbiology,
187 (1),
67-77.
Memoria in extenso
141 - Martínez,M., Vallejo,E.E., Morett,E.. Ancestral DNA sequence reconstruction using recursive genetic algorithms. Lecture Notes in Computer Science, vol 4828 cap 4.
390-400.
Artículo; Actas Paper
142 - Aguilar-Diaz,H., Bobes,R.J., Carrero,J.C., Camacho-Carranza,R., Cervantes,C., Cevallos,M.A., Davila,G., Rodriguez-Dorantes,M., Escobedo,G., Fernandez,J.L., Fragoso,G., Gaytan,P., Garciarrubio,A., Gonzalez,V.M., Gonzalez,L., Jose,M.V., Jimenez,L., Laclette,J.P., Landa,A., Larralde,C., Morales-Montor,J., Morett,E., Ostoa-Saloma,P., Sciutto,E., Santamaria,R.I., Soberon,X., de la Torre P., Valdes,V., Yanez,J.. The genome project of Taenia solium.
Parasitology International,
55 (Suppl),
S127-S130.
Artículo
143 - Avonce,N., Mendoza-Vargas,A., Morett,E., Iturriaga,G.. Insights on the evolution of trehalose biosynthesis.
BMC Evolutionary Biology,
6 (1),
109.
Artículo
144 - Huerta,A.M., Francino,M.P., Morett,E., Collado-Vides,J.. Selection for Unequal Densities of sigma(70) Promoter-Like Signals in Different Regions of Large Bacterial Genomes.
PLoS Genetics,
2 (11),
e185.
Memoria in extenso
145 - Fernandez,J.C., Vallejo,E.E., Morett,E.. Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles. Computational Intelligence and Bioinformatics and Computational Biology, 2006. CIBCB '06. 2006 IEEE Symposium on.
1-8.
Memoria in extenso
146 - Watanabe,R., Vallejo,E.E., Morett,E.. Inferring functional coupling of proteins using the Evolutionary Bond Energy Algorithm. Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06.
400-405.
Artículo
147 - Gaytan,P., Yanez,J., Grande,R., Morett,E., Soberon,X.. Improving random mutagenesis by purification of the oligonucleotide variants.
Combinatorial Chemistry & High Throughput Screening,
8 (6),
537-544.
Artículo
148 - Bordes,P., Wigneshweraraj,S.R., Chaney,M., Dago,A.E., Morett,E., Buck,M.. Communication between Esigma, promoter DNA and the conserved threonine residue in the GAFTGA motif of the PspF sigma-dependent activator during transcription activation.
Molecular Microbiology,
54 (2),
489-506.
Artículo
149 - Ciria,R., Abreu-Goodger,C., Morett,E., Merino,E.. GeConT: gene context analysis.
Bioinformatics,
20 (14),
2307-2308.
Artículo
150 - Morett,E., Garciarrubio,A.. Shuffled: a software suite that assists the analysis of recombinant products resulting from DNA shuffling.
Biotechniques,
37 (3),
354-+.
Artículo
151 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P.. Systematic discovery of analogous enzymes in thiamin biosynthesis.
Nature Biotechnology,
21 (7),
790-795.
Internacional
Artículo; Actas
153 - Morett,E., Korbel,J.O., Rajan,E., Saab-Rincon,G., Olvera,L., Olvera,M., Schmidt,S., Snel,B., Bork,P.. Discovery of Analogous Enzymes in Thiamin Biosynthesis by Anticorrelation.
Genome Informatics,
13,
365-366.
Artículo
154 - Chaney,M., Grande,R., Wigneshweraraj,S.R., Cannon,W., Casaz,P., Gallegos,M.T., Schumacher,J., Jones,S., Elderkin,S., Dago,A.E., Morett,E., Buck,M.. Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminum fluoride: insights into activator mechanochemical action.
Genes and Development,
15 (17),
2282-2294.
Nacional
155 - Morett,E.. Genetic regulation of nitrogen fixation: from ammonia ssimilation to protein evolution. Nitrogen Fixation Research Center XX Anniversary.
180-183.
Artículo
156 - Juarez,K., Flores,H., Davila,S., Olvera,L., Gonzalez,V., Morett,E.. Reciprocal domain evolution within a transactivator in a restricted sequence space.
Proceedings of the National Academy of Sciences of the United States of America,
97 (7),
3314-3318.
Revisión
157 - Barrios,H., Valderrama,B., Morett,E.. Compilation and analysis of sigma(54)-dependent promoter sequences.
Nucleic Acids Research,
27 (22),
4305-4313.
Artículo
158 - Grande,R.A., Valderrama,B., Morett,E.. Suppression analysis of positive control mutants of NifA reveals two overlapping promoters for Klebsiella pneumoniae rpoN.
Journal of Molecular Biology,
294 (2),
291-298.
Artículo
159 - Morett,E., Bork,P.. A novel transactivation domain in parkin.
Trends in Biochemical Sciences,
24 (6),
229-231.
Artículo
160 - Barrios,H., Grande,R., Olvera,L., Morett,E.. In vivo genomic footprinting analysis reveals that the complex Bradyrhizobium japonicum fixRnifA promoter region is differently occupied by two distinct RNA polymerase holoenzymes.
Proceedings of the National Academy of Sciences of the United States of America,
95 (3),
1014-1019.
Artículo
161 - Gonzalez,V., Olvera,L., Soberon,X., Morett,E.. In vivo studies on the positive control function of NifA: a conserved hydrophobic amino acid patch at the central domain involved in transcriptional activation.
Molecular Microbiology,
28 (1),
55-67.
Artículo
162 - Morett,E., Bork,P.. Evolution of new protein function: recombinational enhancer Fis originated by horizontal gene transfer from the transcriptional regulator NtrC.
FEBS Letters,
433 (1-2),
108-112.
Internacional
163 - Morett,E., Juarez,K., Davila,S., Olvera,L., Caro,S., Flores,H.. Enhancing Nitrogen Fixation Gene Expression by Modifying the DNA-Binding Function of Rhizobium meliloti NifA. Biological Nitrogen Fixation for the 21st Century.
Dordrecht, Holanda: Kluwer Academic Publishers.
Artículo
164 - Del Rio,G., Morett,E., Soberon,X.. Did cyclodextrin glycosyltransferases evolve from alpha-amylases?.
FEBS Letters,
416 (2),
221-224.
Artículo
165 - Osuna,J., Soberon,X., Morett,E.. A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.
Protein Science,
6 (3),
543-555.
Artículo
166 - Valderrama,B., Davalos,A., Girard,L., Morett,E., Mora,J.. Regulatory proteins and cis-acting elements involved in the transcriptional control of Rhizobium etli reiterated nifH genes.
Journal of Bacteriology,
178 (11),
3119-3126.
Artículo
167 - Barrios,H., Fischer,H.M., Hennecke,H., Morett,E.. Overlapping promoters for two different RNA polymerase holoenzymes control Bradyrhizobium japonicum nifA expression.
Journal of Bacteriology,
177 (7),
1760-1765.
*
Revisión
168 - Morett,E., Segovia,L.. The sigma 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains.
Journal of Bacteriology,
175 (19),
6067-6074.
*
Artículo
169 - Morett,E., Fischer,H.M., Hennecke,H.. Influence of oxygen on DNA binding, positive control, and stability of the Bradyrhizobium japonicum NifA regulatory protein.
Journal of Bacteriology,
173 (11),
3478-3487.
*
Artículo
170 - Cannon,W.V., Kreutzer,R., Kent,H.M., Morett,E., Buck,M.. Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites.
Nucleic Acids Research,
18 (7),
1693-1701.
*
Artículo
171 - Morett,E., Kreutzer,R., Cannon,W., Buck,M.. The influence of the Klebsiella pneumoniae regulatory gene nifL upon the transcriptional activator protein NifA.
Molecular Microbiology,
4 (8),
1253-1258.
*
Artículo
172 - Morett,E., Buck,M.. In vivo studies on the interaction of RNA polymerase-sigma 54 with the Klebsiella pneumoniae and Rhizobium meliloti nifH promoters. The role of NifA in the formation of an open promoter complex.
Journal of Molecular Biology,
210 (1),
65-77.
*
Artículo
173 - Morett,E., Moreno,S., Espin,G.. Transcription analysis of the three nifH genes of Rhizobium phaseoli with gene fusions.
MGG Molecular & General Genetics,
213 (2-3),
499-504.
*
Artículo
174 - Morett,E., Cannon,W., Buck,M.. The DNA-binding domain of the transcriptional activator protein NifA resides in its carboxy terminus, recognises the upstream activator sequences of nif promoters and can be separated from the positive control function of NifA.
Nucleic Acids Research,
16 (24),
11469-11488.
*
Artículo
175 - Morett,E., Buck,M.. NifA-dependent in vivo protection demonstrates that the upstream activator sequence of nif promoters is a protein binding site.
Proceedings of the National Academy of Sciences of the United States of America,
85 (24),
9401-9405.
*
Note
176 - Romero,D., Singleton,P.W., Segovia,L., Morett,E., Benbohlool,B., Palacios,R., Davila,G.. Effect of Naturally Occurring nif Reiterations on Symbiotic Effectiveness in Rhizobium phaseoli.
Applied and Environmental Microbiology,
54 (3),
848-850.
*
177 - Morett Sanchez, Juan Enrique. - Analisis transcripcional de los genes reiterados de la nitrogenasa reductasa en Rhizobium phaseoli / tesis que para obtener el grado de presenta Juan Enrique Morett Sanchez ; asesor Elda Guadalupe Espin Ocampo.
CIFN,
Maestria en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe
Note
178 - Calderon,J., Morett,E., Mora,J.. Omega-amidase pathway in the degradation of glutamine in Neurospora crassa.
Journal of Bacteriology,
161 (2),
807-809.
*
Artículo
179 - Morett,E., Moreno,S., Espin,G.. Impaired nitrogen fixation and glutamine synthesis in methionine sulfoximine sensitive (MSs) mutants of Rhizobium phaseoli.
MGG Molecular & General Genetics,
200 (2),
229-234.
*
180 - Morett Sanchez, Juan Enrique. Obtencion y analisis de mutaciones que afectan la actividad de la nitrogenasa y de un glutamino sintetasa en rhizobium phaseoli.
CIFN,
Licenciatura en Investigacion Biomedica Basica,
UNAM.
*
Asesor: Espin Ocampo, Elda Guadalupe