Investigador en estancia postdoctoral
Licenciatura, DOCTORADO EN BIOTECNOLOGIA
Total de publicaciones: 18
- Tipo
- Fecha
Artículo
1 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F. (2022). Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico.
Viruses,
14 (6),
1165.
Artículo
2 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F. (2022). The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico.
Microbiology Spectrum,
10 (2),
e0224021.
Artículo
3 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Garcia-Lopez,R., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Hernandez-Reyna,A., Mendoza-Vargas,A., Ochoa-Leyva,A. (2021). Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome.
iScience,
24 (8),
102900.
Artículo
4 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Cota-Huizar,A., Sotelo-Mundo,R.R., Gomez-Gil,B., Ochoa-Leyva,A. (2021). OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters.
Genes (Basel),
12 (4),
564.
Artículo
5 - Gallardo-Becerra,L., Cornejo-Granados,F., Garcia-Lopez,R., Valdez-Lara,A., Bikel,S., Canizales-Quinteros,S., Lopez-Contreras,B.E., Mendoza-Vargas,A., Nielsen,H., Ochoa-Leyva,A. (2020). Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children.
Microbial Cell Factories,
19 (1),
61.
Artículo
6 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Sanchez-Lopez,F., Cota-Huizar,A., Sotelo-Mundo,R.R., Guerrero,A., Mendoza-Vargas,A., Gomez-Gil,B., Ochoa-Leyva,A. (2020). Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota.
Microorganisms,
8 (1).
Artículo
7 - Mendez-Perez,R., Garcia-Lopez,R., Bautista-Lopez,J.S., Vazquez-Castellanos,J., Alvarez-Gonzalez,C., Pena-Marin,E., Baltierra-Trejo,E., Adams-Schroeder,R., Dominguez-Rodriguez,V., Melgar-Valdes,C., Martinez-Garcia,R., Moya,A., Gomez-Cruz,R. (2020). High-throughput sequencing of the 16S rRNA gene to analyze the gut microbiome in juvenile and adult tropical gar (Atractosteus tropicus).
Latin American Journal of Aquatic Research,
48 (3),
456-479.
*
Artículo
8 - Amaretti,A., Gozzoli,C., Simone,M., Raimondi,S., Righini,L., Perez-Brocal,V., Garcia-Lopez,R., Moya,A., Rossi,M. (2019). Profiling of Protein Degraders in Cultures of Human Gut Microbiota.
Frontiers in Microbiology,
10.
*
Revisión
9 - Garcia-Lopez,R., Perez-Brocal,V., Moya,A. (2019). Beyond cells - The virome in the human holobiont.
Microbial Cell,
6 (9),
373-396.
*
Artículo
10 - Garcia-Lopez,R., Vazquez-Castellanos,J.F., Moya,A. (2015). Fragmentation and coverage variation in viral metagenome assemblies, and their effect in diversity calculations.
Frontiers in Bioengineering and Biotechnology,
3,
141.
*
Artículo
11 - Perez-Brocal,V., Garcia-Lopez,R., Nos,P., Beltran,B., Moret,I., Moya,A. (2015). Metagenomic Analysis of Crohn's Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers.
Inflammatory Bowel Diseases,
21 (11),
2515-2532.
*
Artículo
12 - Garcia-Lopez,R., Moya,A., Bagan,J.V., Perez-Brocal,V. (2014). Retrospective case-control study of viral pathogen screening in proliferative verrucous leukoplakia lesions.
Clinical Otolaryngology,
39 (5),
272-280.
*
Revisión
13 - Gonzalez-Candelas,F., Bracho,M.A., Comas,I., Auria,G.D., Dzunkova,M., Garcia,R., Gosalbes,M.J., Isaac,S., Latorre,A., Lopez-Labrador,F.X., Galindo,J.A.P., Palero,F., Perez-Brocal,V., Perez-Cobas,A.E., Sanchez-Buso,L., Silva,F.J., Vazquez-Castellanos,J.F., Moya,A. (2014). Estudios de epidemiología molecular en población inmigrante en España.
Revista Espanola de Salud Publica,
88 (6),
819-828.
*
Artículo
14 - Vazquez-Castellanos,J.F., Garcia-Lopez,R., Perez-Brocal,V., Pignatelli,M., Moya,A. (2014). Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut.
BMC Genomics,
15,
37.
*
Articulo
15 - Perez-Brocal,V., Garcia-Lopez,R., Vazquez-Castellanos,J.F., Nos,P., Beltran,B., Latorre,A., Moya,A. (2013). Study of the Viral and Microbial Communities Associated With Crohn's Disease: A Metagenomic Approach.
Clinical and Translational Gastroenterology,
4,
e36.
*
Artículo
16 - Garcia-Lopez,R., Perez-Brocal,V., Diez-Domingo,J., Moya,A. (2012). Gut Microbiota in Children Vaccinated with Rotavirus Vaccine.
Pediatric Infectious Disease Journal,
31 (12),
1300-1302.
*
Artículo
17 - Quinto-Cortes,C.D., Arriola,L.A., Garcia-Hughes,G., Garcia-Lopez,R., Molina,D.P., Flores,M., Palacios,R., Pinero,D. (2010). Genetic Characterization of Indigenous Peoples from Oaxaca, Mexico, and Its Relation to Linguistic and Geographic Isolation.
Human BiologyHum.Biol.,
82 (4),
409-432.
*
Capítulo internacional
18 - Garcia-Lopez,R. (2018). Construction of a Comprehensive Database from the Existing Viral Sequences Available from the International Nucleotide Sequence Database Collaboration. Methods in Molecular Biology 1838.
231-243,
1838.
*
Artículo
19 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F.. Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico.
Viruses,
14 (6),
1165.
Artículo
20 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F.. The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico.
Microbiology Spectrum,
10 (2),
e0224021.
Artículo
21 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Garcia-Lopez,R., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Hernandez-Reyna,A., Mendoza-Vargas,A., Ochoa-Leyva,A.. Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome.
iScience,
24 (8),
102900.
Artículo
22 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Cota-Huizar,A., Sotelo-Mundo,R.R., Gomez-Gil,B., Ochoa-Leyva,A.. OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters.
Genes (Basel),
12 (4),
564.
Artículo
23 - Gallardo-Becerra,L., Cornejo-Granados,F., Garcia-Lopez,R., Valdez-Lara,A., Bikel,S., Canizales-Quinteros,S., Lopez-Contreras,B.E., Mendoza-Vargas,A., Nielsen,H., Ochoa-Leyva,A.. Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children.
Microbial Cell Factories,
19 (1),
61.
Artículo
24 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Sanchez-Lopez,F., Cota-Huizar,A., Sotelo-Mundo,R.R., Guerrero,A., Mendoza-Vargas,A., Gomez-Gil,B., Ochoa-Leyva,A.. Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota.
Microorganisms,
8 (1).
Artículo
25 - Mendez-Perez,R., Garcia-Lopez,R., Bautista-Lopez,J.S., Vazquez-Castellanos,J., Alvarez-Gonzalez,C., Pena-Marin,E., Baltierra-Trejo,E., Adams-Schroeder,R., Dominguez-Rodriguez,V., Melgar-Valdes,C., Martinez-Garcia,R., Moya,A., Gomez-Cruz,R.. High-throughput sequencing of the 16S rRNA gene to analyze the gut microbiome in juvenile and adult tropical gar (Atractosteus tropicus).
Latin American Journal of Aquatic Research,
48 (3),
456-479.
*
Artículo
26 - Amaretti,A., Gozzoli,C., Simone,M., Raimondi,S., Righini,L., Perez-Brocal,V., Garcia-Lopez,R., Moya,A., Rossi,M.. Profiling of Protein Degraders in Cultures of Human Gut Microbiota.
Frontiers in Microbiology,
10.
*
Revisión
27 - Garcia-Lopez,R., Perez-Brocal,V., Moya,A.. Beyond cells - The virome in the human holobiont.
Microbial Cell,
6 (9),
373-396.
*
Capítulo internacional
28 - Garcia-Lopez,R.. Construction of a Comprehensive Database from the Existing Viral Sequences Available from the International Nucleotide Sequence Database Collaboration. Methods in Molecular Biology 1838.
231-243,
1838.
*
Artículo
29 - Garcia-Lopez,R., Vazquez-Castellanos,J.F., Moya,A.. Fragmentation and coverage variation in viral metagenome assemblies, and their effect in diversity calculations.
Frontiers in Bioengineering and Biotechnology,
3,
141.
*
Artículo
30 - Perez-Brocal,V., Garcia-Lopez,R., Nos,P., Beltran,B., Moret,I., Moya,A.. Metagenomic Analysis of Crohn's Disease Patients Identifies Changes in the Virome and Microbiome Related to Disease Status and Therapy, and Detects Potential Interactions and Biomarkers.
Inflammatory Bowel Diseases,
21 (11),
2515-2532.
*
Artículo
31 - Garcia-Lopez,R., Moya,A., Bagan,J.V., Perez-Brocal,V.. Retrospective case-control study of viral pathogen screening in proliferative verrucous leukoplakia lesions.
Clinical Otolaryngology,
39 (5),
272-280.
*
Revisión
32 - Gonzalez-Candelas,F., Bracho,M.A., Comas,I., Auria,G.D., Dzunkova,M., Garcia,R., Gosalbes,M.J., Isaac,S., Latorre,A., Lopez-Labrador,F.X., Galindo,J.A.P., Palero,F., Perez-Brocal,V., Perez-Cobas,A.E., Sanchez-Buso,L., Silva,F.J., Vazquez-Castellanos,J.F., Moya,A.. Estudios de epidemiología molecular en población inmigrante en España.
Revista Espanola de Salud Publica,
88 (6),
819-828.
*
Artículo
33 - Vazquez-Castellanos,J.F., Garcia-Lopez,R., Perez-Brocal,V., Pignatelli,M., Moya,A.. Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut.
BMC Genomics,
15,
37.
*
Articulo
34 - Perez-Brocal,V., Garcia-Lopez,R., Vazquez-Castellanos,J.F., Nos,P., Beltran,B., Latorre,A., Moya,A.. Study of the Viral and Microbial Communities Associated With Crohn's Disease: A Metagenomic Approach.
Clinical and Translational Gastroenterology,
4,
e36.
*
Artículo
35 - Garcia-Lopez,R., Perez-Brocal,V., Diez-Domingo,J., Moya,A.. Gut Microbiota in Children Vaccinated with Rotavirus Vaccine.
Pediatric Infectious Disease Journal,
31 (12),
1300-1302.
*
Artículo
36 - Quinto-Cortes,C.D., Arriola,L.A., Garcia-Hughes,G., Garcia-Lopez,R., Molina,D.P., Flores,M., Palacios,R., Pinero,D.. Genetic Characterization of Indigenous Peoples from Oaxaca, Mexico, and Its Relation to Linguistic and Geographic Isolation.
Human BiologyHum.Biol.,
82 (4),
409-432.
*