Dr. Jaime Arturo Pimentel Cabrera
Técnico Académico
Total de publicaciones: 16
- Tipo
- Fecha
Artículo
1 - Sanchez-Jaramillo,E., Wittmann,G., Menyhert,J., Singru,P., Gomez-Gonzalez,G.B., Sanchez-Islas,E., Yanez-Recendis,N., Pimentel-Cabrera,J.A., Leon-Olea,M., Gereben,B., Fekete,C., Charli,J.L., Lechan,R.M. (2022). Origin of thyrotropin-releasing hormone neurons that innervate the tuberomammillary nuclei.
Brain structure & function,
227,
2329-2347.
Note
2 - Hammer,M., Huisman,M., Rigano,A., Boehm,U., Chambers,J.J., Gaudreault,N., North,A.J., Pimentel,J.A., Sudar,D., Bajcsy,P., Brown,C.M., Corbett,A.D., Faklaris,O., Lacoste,J., Laude,A., Nelson,G., Nitschke,R., Farzam,F., Smith,C.S., Grunwald,D., Strambio-De-Castillia,C. (2021). Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.
Nature Methods,
18,
1427-1440 [correction 3 Jan 2022].
Artículo
3 - Hidalgo,P., Pimentel,A., Mojica-Santamaria,D., von Stromberg,K., Hofmann-Sieber,H., Lona-Arrona,C., Dobner,T., Gonzalez,R.A. (2021). Evidence that the adenovirus single-stranded DNA binding protein mediates the assembly of biomolecular condensates to form viral replication compartments.
Viruses,
13 (9),
1778.
Artículo
4 - Nelson,G., Boehm,U., Bagley,S., Bajcsy,P., Bischof,J., Brown,C.M., Dauphin,A., Dobbie,I.M., Eriksson,J.E., Faklaris,O., Fernandez-Rodriguez,J., Ferrand,A., Gelman,L., Gheisari,A., Hartmann,H., Kukat,C., Laude,A., Mitkovski,M., Munck,S., North,A.J., Rasse,T.M., Resch-Genger,U., Schuetz,L.C., Seitz,A., Strambio-De-Castillia,C., Swedlow,J.R., Alexopoulos,I., Aumayr,K., Avilov,S., Bakker,G.J., Bammann,R.R., Bassi,A., Beckert,H., Beer,S., Belyaev,Y., Bierwagen,J., Birngruber,K.A., Bosch,M., Breitlow,J., Cameron,L.A., Chalfoun,J., Chambers,J.J., Chen,C.L., Conde-Sousa,E., Corbett,A.D., Cordelieres,F.P., Nery,E.D., Dietzel,R., Eismann,F., Fazeli,E., Felscher,A., Fried,H., Gaudreault,N., Goh,W.I., Guilbert,T., Hadleigh,R., Hemmerich,P., Holst,G.A., Itano,M.S., Jaffe,C.B., Jambor,H.K., Jarvis,S.C., Keppler,A., Kirchenbuechler,D., Kirchner,M., Kobayashi,N., Krens,G., Kunis,S., Lacoste,J., Marcello,M., Martins,G.G., Metcalf,D.J., Mitchell,C.A., Moore,J., Mueller,T., Nelson,M.S., Ogg,S., Onami,S., Palmer,A.L., Paul-Gilloteaux,P., Pimentel,J.A., Plantard,L., Podder,S., Rexhepaj,E., Royon,A., Saari,M.A., Schapman,D., Schoonderwoert,V., Schroth-Diez,B., Schwartz,S., Shaw,M., Spitaler,M., Stoeckl,M.T., Sudar,D., Teillon,J., Terjung,S., Thuenauer,R., Wilms,C.D., Wright,G.D., Nitschke,R. (2021). QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy.
Journal of Microscopy,
284 (1),
56-73.
Note
5 - Rigano,A., Ehmsen,S., Ozturk,S.U., Ryan,J., Balashov,A., Hammer,M., Kirli,K., Bellve,K., Boehm,U., Brown,C.M., Chambers,J.J., Coleman,R.A., Cosolo,A., Faklaris,O., Fogarty,K., Guilbert,T., Hamacher,A.B., Itano,M.S., Keeley,D.P., Kunis,S., Lacoste,J., Laude,A., Ma,W., Marcello,M., Montero-Llopis,P., Nelson,G., Nitschke,R., Pimentel,J.A., Weidtkamp-Peters,S., Park,P.J., Alver,B., Grunwald,D., Strambio-De-Castillia,C. (2021). Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications.
Nature Methods,
18,
1489-1495.
Artículo
6 - Lopez-Damian, E.P., Jimenez-Medina, J.A., Lammoglia, M.A., Pimentel, J.A., Agredano-Moreno, L.T., Wood, C., Galina, C.S., Fiordelisio, T. (2018). Lipid droplets in clusters negatively affect Bos indicus embryos during cryopreservation.
Anatomia, Histologia, Embryologia,
47 (5),
435-443.
Artículo
7 - Pacheco-Escobedo,M.A., Ivanov,V.B., Ransom-Rodriguez,I., Arriaga-Mejia,G., Avila,H., Baklanov,I.A., Pimentel,A., Corkidi,G., Doerner,P., Dubrovsky,J.G., Alvarez-Buylla,E.R., Garay-Arroyo,A. (2016). Longitudinal zonation pattern in Arabidopsis root tip defined by a multiple structural change algorithm.
Annals of Botany,
118 (4),
763-776.
Artículo
8 - Medina-Andres,R., Solano-Peralta,A., Saucedo-Vazquez,J.P., Napsucialy-Mendivil,S., Pimentel-Cabrera,J.A., Sosa-Torres,M.E., Dubrovsky,J.G., Lira-Ruan,V. (2015). The Nitric Oxide Production in the Moss Physcomitrella patens Is Mediated by Nitrate Reductase.
PLoS ONE,
10 (3),
e0119400.
Artículo
9 - Wucherpfennig,T., Schulz,A., Pimentel,J.A., Corkidi,G., Sieblitz,D., Pump,M., Gorr,G., Schutte,K., Wittmann,C., Krull,R. (2014). Viability characterization of Taxus chinensis plant cell suspension cultures by rapid colorimetric- and image analysis-based techniques.
Bioprocess and Biosystems Engineering,
37 (9),
1799-1808.
Artículo
10 - Corkidi,G., Rojas,A., Pimentel,A., Galindo,E. (2012). Visualization of compound drops formation in multiphase processes for the identification of factors influencing bubble and water droplet inclusions in oil drops.
Chemical Engineering Research & Design,
90 (11),
1727-1738.
Artículo
11 - Pimentel,J.A., Carneiro,J., Darszon,A., Corkidi,G. (2012). A segmentation algorithm for automated tracking of fast swimming unlabelled cells in three dimensions.
Journal of Microscopy,
245 (1),
72-81.
Revisión
12 - Guerrero,A., Carneiro,J., Pimentel,A., Wood,C.D., Corkidi,G., Darszon,A. (2011). Strategies for locating the female gamete: the importance of measuring sperm trajectories in three spatial dimensions.
Molecular Human Reproduction,
17 (8),
511-523.
Memoria in extenso
13 - Silva-Villalobos,F., Pimentel,J.A., Darszon,A., Corkidi,G. (2014). Imaging of the 3D dynamics of flagellar beating in human sperm. Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE.
Conf Proc IEEE Eng Med Biol Soc,
190-193,
2014.
Preprint
14 - Hammer,M., Huisman,M., Rigano,A., Boehm,U., Chambers,J.J., Gaudreault,N., North,A.J., Pimentel,J.A., Sudar,D., Bajcsy,P., Brown,C.M., Corbett,A.D., Faklaris,O., Lacoste,J., Laude,A., Nelson,G., Nitschke,R., Farzam,F., Smith,C., Grunwald,D., Strambio-De-Castillia,C. (2021). Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.
bioRxiv,
Preprint posted April 26, 2021.
preprint
15 - Rigano,A., Ehmsen,S., Ozturk,S.U., Ryan,J., Balashov,A., Hammer,M., Kirli,K., Bellve,K., Boehm,U., Brown,C.M., Chambers,J.J., Coleman,R.A., Cosolo,A., Faklaris,O., Fogarty,K., Guilbert,T., Hamacher,A.B., Itano,M.S., Keeley,D.P., Kunis,S., Lacoste,J., Laude,A., Ma,W., Marcello,M., Montero-Llopis,P., Nelson,G., Nitschke,R., Pimentel,J.A., Weidtkamp-Peters,S., Park,P.J., Alver,B., Grunwald,D., Strambio-De-Castillia,C. (2021). Micro-Meta App: an interactive software tool to facilitate the collection of microscopy metadata based on community-driven specifications.
bioRxiv,
Preprint posted May 31.
16 - Pimentel Cabrera, Jaime Arturo (2013). Sistema de rastreo tridimensional de micro-partículas : aplicación en el rastreo de espermatozoides al nado libre .
Doctorado en Ciencia e Ingeniería de la Computación,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
Artículo
17 - Sanchez-Jaramillo,E., Wittmann,G., Menyhert,J., Singru,P., Gomez-Gonzalez,G.B., Sanchez-Islas,E., Yanez-Recendis,N., Pimentel-Cabrera,J.A., Leon-Olea,M., Gereben,B., Fekete,C., Charli,J.L., Lechan,R.M.. Origin of thyrotropin-releasing hormone neurons that innervate the tuberomammillary nuclei.
Brain structure & function,
227,
2329-2347.
Note
18 - Hammer,M., Huisman,M., Rigano,A., Boehm,U., Chambers,J.J., Gaudreault,N., North,A.J., Pimentel,J.A., Sudar,D., Bajcsy,P., Brown,C.M., Corbett,A.D., Faklaris,O., Lacoste,J., Laude,A., Nelson,G., Nitschke,R., Farzam,F., Smith,C.S., Grunwald,D., Strambio-De-Castillia,C.. Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.
Nature Methods,
18,
1427-1440 [correction 3 Jan 2022].
Artículo
19 - Hidalgo,P., Pimentel,A., Mojica-Santamaria,D., von Stromberg,K., Hofmann-Sieber,H., Lona-Arrona,C., Dobner,T., Gonzalez,R.A.. Evidence that the adenovirus single-stranded DNA binding protein mediates the assembly of biomolecular condensates to form viral replication compartments.
Viruses,
13 (9),
1778.
Artículo
20 - Nelson,G., Boehm,U., Bagley,S., Bajcsy,P., Bischof,J., Brown,C.M., Dauphin,A., Dobbie,I.M., Eriksson,J.E., Faklaris,O., Fernandez-Rodriguez,J., Ferrand,A., Gelman,L., Gheisari,A., Hartmann,H., Kukat,C., Laude,A., Mitkovski,M., Munck,S., North,A.J., Rasse,T.M., Resch-Genger,U., Schuetz,L.C., Seitz,A., Strambio-De-Castillia,C., Swedlow,J.R., Alexopoulos,I., Aumayr,K., Avilov,S., Bakker,G.J., Bammann,R.R., Bassi,A., Beckert,H., Beer,S., Belyaev,Y., Bierwagen,J., Birngruber,K.A., Bosch,M., Breitlow,J., Cameron,L.A., Chalfoun,J., Chambers,J.J., Chen,C.L., Conde-Sousa,E., Corbett,A.D., Cordelieres,F.P., Nery,E.D., Dietzel,R., Eismann,F., Fazeli,E., Felscher,A., Fried,H., Gaudreault,N., Goh,W.I., Guilbert,T., Hadleigh,R., Hemmerich,P., Holst,G.A., Itano,M.S., Jaffe,C.B., Jambor,H.K., Jarvis,S.C., Keppler,A., Kirchenbuechler,D., Kirchner,M., Kobayashi,N., Krens,G., Kunis,S., Lacoste,J., Marcello,M., Martins,G.G., Metcalf,D.J., Mitchell,C.A., Moore,J., Mueller,T., Nelson,M.S., Ogg,S., Onami,S., Palmer,A.L., Paul-Gilloteaux,P., Pimentel,J.A., Plantard,L., Podder,S., Rexhepaj,E., Royon,A., Saari,M.A., Schapman,D., Schoonderwoert,V., Schroth-Diez,B., Schwartz,S., Shaw,M., Spitaler,M., Stoeckl,M.T., Sudar,D., Teillon,J., Terjung,S., Thuenauer,R., Wilms,C.D., Wright,G.D., Nitschke,R.. QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy.
Journal of Microscopy,
284 (1),
56-73.
Note
21 - Rigano,A., Ehmsen,S., Ozturk,S.U., Ryan,J., Balashov,A., Hammer,M., Kirli,K., Bellve,K., Boehm,U., Brown,C.M., Chambers,J.J., Coleman,R.A., Cosolo,A., Faklaris,O., Fogarty,K., Guilbert,T., Hamacher,A.B., Itano,M.S., Keeley,D.P., Kunis,S., Lacoste,J., Laude,A., Ma,W., Marcello,M., Montero-Llopis,P., Nelson,G., Nitschke,R., Pimentel,J.A., Weidtkamp-Peters,S., Park,P.J., Alver,B., Grunwald,D., Strambio-De-Castillia,C.. Micro-Meta App: an interactive tool for collecting microscopy metadata based on community specifications.
Nature Methods,
18,
1489-1495.
Preprint
22 - Hammer,M., Huisman,M., Rigano,A., Boehm,U., Chambers,J.J., Gaudreault,N., North,A.J., Pimentel,J.A., Sudar,D., Bajcsy,P., Brown,C.M., Corbett,A.D., Faklaris,O., Lacoste,J., Laude,A., Nelson,G., Nitschke,R., Farzam,F., Smith,C., Grunwald,D., Strambio-De-Castillia,C.. Towards community-driven metadata standards for light microscopy: tiered specifications extending the OME model.
bioRxiv,
Preprint posted April 26, 2021.
preprint
23 - Rigano,A., Ehmsen,S., Ozturk,S.U., Ryan,J., Balashov,A., Hammer,M., Kirli,K., Bellve,K., Boehm,U., Brown,C.M., Chambers,J.J., Coleman,R.A., Cosolo,A., Faklaris,O., Fogarty,K., Guilbert,T., Hamacher,A.B., Itano,M.S., Keeley,D.P., Kunis,S., Lacoste,J., Laude,A., Ma,W., Marcello,M., Montero-Llopis,P., Nelson,G., Nitschke,R., Pimentel,J.A., Weidtkamp-Peters,S., Park,P.J., Alver,B., Grunwald,D., Strambio-De-Castillia,C.. Micro-Meta App: an interactive software tool to facilitate the collection of microscopy metadata based on community-driven specifications.
bioRxiv,
Preprint posted May 31.
Artículo
24 - Lopez-Damian, E.P., Jimenez-Medina, J.A., Lammoglia, M.A., Pimentel, J.A., Agredano-Moreno, L.T., Wood, C., Galina, C.S., Fiordelisio, T.. Lipid droplets in clusters negatively affect Bos indicus embryos during cryopreservation.
Anatomia, Histologia, Embryologia,
47 (5),
435-443.
Artículo
25 - Pacheco-Escobedo,M.A., Ivanov,V.B., Ransom-Rodriguez,I., Arriaga-Mejia,G., Avila,H., Baklanov,I.A., Pimentel,A., Corkidi,G., Doerner,P., Dubrovsky,J.G., Alvarez-Buylla,E.R., Garay-Arroyo,A.. Longitudinal zonation pattern in Arabidopsis root tip defined by a multiple structural change algorithm.
Annals of Botany,
118 (4),
763-776.
Artículo
26 - Medina-Andres,R., Solano-Peralta,A., Saucedo-Vazquez,J.P., Napsucialy-Mendivil,S., Pimentel-Cabrera,J.A., Sosa-Torres,M.E., Dubrovsky,J.G., Lira-Ruan,V.. The Nitric Oxide Production in the Moss Physcomitrella patens Is Mediated by Nitrate Reductase.
PLoS ONE,
10 (3),
e0119400.
Artículo
27 - Wucherpfennig,T., Schulz,A., Pimentel,J.A., Corkidi,G., Sieblitz,D., Pump,M., Gorr,G., Schutte,K., Wittmann,C., Krull,R.. Viability characterization of Taxus chinensis plant cell suspension cultures by rapid colorimetric- and image analysis-based techniques.
Bioprocess and Biosystems Engineering,
37 (9),
1799-1808.
Memoria in extenso
28 - Silva-Villalobos,F., Pimentel,J.A., Darszon,A., Corkidi,G.. Imaging of the 3D dynamics of flagellar beating in human sperm. Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE.
Conf Proc IEEE Eng Med Biol Soc,
190-193,
2014.
29 - Pimentel Cabrera, Jaime Arturo. Sistema de rastreo tridimensional de micro-partículas : aplicación en el rastreo de espermatozoides al nado libre .
Doctorado en Ciencia e Ingeniería de la Computación,
UNAM.
*
Asesor: Corkidi Blanco, Gabriel
Artículo
30 - Corkidi,G., Rojas,A., Pimentel,A., Galindo,E.. Visualization of compound drops formation in multiphase processes for the identification of factors influencing bubble and water droplet inclusions in oil drops.
Chemical Engineering Research & Design,
90 (11),
1727-1738.
Artículo
31 - Pimentel,J.A., Carneiro,J., Darszon,A., Corkidi,G.. A segmentation algorithm for automated tracking of fast swimming unlabelled cells in three dimensions.
Journal of Microscopy,
245 (1),
72-81.
Revisión
32 - Guerrero,A., Carneiro,J., Pimentel,A., Wood,C.D., Corkidi,G., Darszon,A.. Strategies for locating the female gamete: the importance of measuring sperm trajectories in three spatial dimensions.
Molecular Human Reproduction,
17 (8),
511-523.
- Teléfonos
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Oficina +52 (777) 329-1777 ext 38150.
desde la CDMX 562-27777 ext 38150
Red UNAM 38150