Dr. Rodrigo García López
Investigador Posdoctoral CONAHCyT

  • Licenciatura, DOCTORADO EN BIOTECNOLOGIA

Total de publicaciones: 27
  • Tipo
  • Fecha
Open Access Artículo
1 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2024). Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
Open Access Artículo
3 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M. (2023). Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Artículo
4 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
5 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F (2023). Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Open Access Revisión
6 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C. (2022). The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
7 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F. (2022). Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
8 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F. (2022). Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
9 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F. (2022). The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Open Access Artículo
11 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Cota-Huizar,A., Sotelo-Mundo,R.R., Gomez-Gil,B., Ochoa-Leyva,A. (2021). OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters. Genes (Basel), 12 (4), 564.
Open Access Artículo
13 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Sanchez-Lopez,F., Cota-Huizar,A., Sotelo-Mundo,R.R., Guerrero,A., Mendoza-Vargas,A., Gomez-Gil,B., Ochoa-Leyva,A. (2020). Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota. Microorganisms, 8 (1).
Open Access Artículo
14 - Mendez-Perez,R., Garcia-Lopez,R., Bautista-Lopez,J.S., Vazquez-Castellanos,J., Alvarez-Gonzalez,C., Pena-Marin,E., Baltierra-Trejo,E., Adams-Schroeder,R., Dominguez-Rodriguez,V., Melgar-Valdes,C., Martinez-Garcia,R., Moya,A., Gomez-Cruz,R. (2020). High-throughput sequencing of the 16S rRNA gene to analyze the gut microbiome in juvenile and adult tropical gar (Atractosteus tropicus). Latin American Journal of Aquatic Research, 48 (3), 456-479. *
Open Access Artículo
15 - Amaretti,A., Gozzoli,C., Simone,M., Raimondi,S., Righini,L., Perez-Brocal,V., Garcia-Lopez,R., Moya,A., Rossi,M. (2019). Profiling of Protein Degraders in Cultures of Human Gut Microbiota. Frontiers in Microbiology, 10. *
Open Access Revisión
16 - Garcia-Lopez,R., Perez-Brocal,V., Moya,A. (2019). Beyond cells - The virome in the human holobiont. Microbial Cell, 6 (9), 373-396. *
Open Access Artículo
17 - Garcia-Lopez,R., Vazquez-Castellanos,J.F., Moya,A. (2015). Fragmentation and coverage variation in viral metagenome assemblies, and their effect in diversity calculations. Frontiers in Bioengineering and Biotechnology, 3, 141. *
Open Access Artículo
Artículo
19 - Garcia-Lopez,R., Moya,A., Bagan,J.V., Perez-Brocal,V. (2014). Retrospective case-control study of viral pathogen screening in proliferative verrucous leukoplakia lesions. Clinical Otolaryngology, 39 (5), 272-280. *
Open Access Revisión
20 - Gonzalez-Candelas,F., Bracho,M.A., Comas,I., Auria,G.D., Dzunkova,M., Garcia,R., Gosalbes,M.J., Isaac,S., Latorre,A., Lopez-Labrador,F.X., Galindo,J.A.P., Palero,F., Perez-Brocal,V., Perez-Cobas,A.E., Sanchez-Buso,L., Silva,F.J., Vazquez-Castellanos,J.F., Moya,A. (2014). Estudios de epidemiología molecular en población inmigrante en España. Revista Espanola de Salud Publica, 88 (6), 819-828. *
Open Access Artículo
21 - Vazquez-Castellanos,J.F., Garcia-Lopez,R., Perez-Brocal,V., Pignatelli,M., Moya,A. (2014). Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut. BMC Genomics, 15, 37. *
Articulo
22 - Perez-Brocal,V., Garcia-Lopez,R., Vazquez-Castellanos,J.F., Nos,P., Beltran,B., Latorre,A., Moya,A. (2013). Study of the Viral and Microbial Communities Associated With Crohn's Disease: A Metagenomic Approach. Clinical and Translational Gastroenterology, 4, e36. *
Artículo
23 - Garcia-Lopez,R., Perez-Brocal,V., Diez-Domingo,J., Moya,A. (2012). Gut Microbiota in Children Vaccinated with Rotavirus Vaccine. Pediatric Infectious Disease Journal, 31 (12), 1300-1302. *
Open Access Artículo
24 - Quinto-Cortes,C.D., Arriola,L.A., Garcia-Hughes,G., Garcia-Lopez,R., Molina,D.P., Flores,M., Palacios,R., Pinero,D. (2010). Genetic Characterization of Indigenous Peoples from Oaxaca, Mexico, and Its Relation to Linguistic and Geographic Isolation. Human BiologyHum.Biol., 82 (4), 409-432. *
Preprint
26 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F. (2023). SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Preprint
27 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F. (2022). SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Artículo
28 - Garcia-Lopez,R., Taboada,B., Zarate,S., Munoz-Medina,J.E., Salas-Lais,A.G., Herrera-Estrella,A., Boukadida,C., Vazquez-Perez,J.A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover. Microbial Genomics, 10 (3), 001220.
Open Access Artículo
Open Access Artículo
30 - Loza,A., Wong-Chew,R.M., Jimenez-Corona,M.E., Zarate,S., Lopez,S., Ciria,R., Palomares,D., Garcia-Lopez,R., Isa,P., Taboada,B., Rosales,M., Boukadida,C., Herrera-Estrella,A., Mojica,N.S., Rivera-Gutierrez,X., Munoz-Medina,J.E., Salas-Lais,A.G., Sanchez-Flores,A., Vazquez-Perez,J.A., Arias,C.F., Gutierrez-Rios,R.M.. Two-year follow-up of the COVID-19 pandemic in Mexico. Frontiers in Public Health, 10, 1050673.
Open Access Artículo
31 - Taboada,B.I., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Microbial Genomics, 9 (12), 001120.
Open Access Artículo
32 - Zarate,S., Taboada,B., Rosales-Rivera,M., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Gomez-Gil,B., Selem-Mojica N., Salas-Lais,A.G., Vazquez-Perez,J.A., Cabrera-Gaytan,D.A., Fernandes-Matano,L., Uribe-Noguez,L.A., Chale-Dzul,J.B., Maldonado Meza,B.I., Mejia-Nepomuceno,F., Perez-Padilla,R., Gutierrez-Rios,R.M., Loza,A, Roche,B, Lopez,S, Arias,C.F. Omicron-BA.1 Dispersion Rates in Mexico Varied According to the Regional Epidemic Patterns and the Diversity of Local Delta Subvariants. Viruses, 15 (1), 243.
Preprint
33 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J., Gomez-Gil,B., Herrera-Estrella,A., Sanchez-Flores,A., Salas-Lais,A.G., Roche,B., Martinez-Morales,G., Dominguez-Zarate,H., Duque-Molina,C., Aviles-Hernandez,R., Lopez,S., Arias,C.F.. SARS-CoV-2 Omicron variants BA.4 and BA.5 dominated the fifth COVID-19 epidemiological wave in Mexico. Authorea, Preprint.
Open Access Revisión
34 - Garcia-Lopez,R., Laresgoiti-Servitje,E., Lemus-Martin,R., Sanchez-Flores,A., Sanders-Velez,C.. The New SARS-CoV-2 Variants and Their Epidemiological Impact in Mexico. MBio, 13 (5), e0106021.
Open Access Artículo
35 - Isa,P., Taboada,B., Garcia-Lopez,R., Boukadida,C., Ramirez-Gonzalez,J.E., Vazquez-Perez,J.A., Hernandez-Teran,A., Romero-Espinoza,J.A., Munoz-Medina,J.E., Grajales-Muniz,C., Rincon-Rubio,A., Matias-Florentino,M., Sanchez-Flores,A., Mendieta-Condado,E., Barrera-Badillo,G., Lopez,S., Hernandez-Rivas,L., Lopez-Martinez,I., Avila-Rios,S., Arias,C.F.. Metagenomic analysis reveals differences in the co-occurrence and abundance of viral species in SARS-CoV-2 patients with different severity of disease. BMC Infectious Diseases, 22 (1), 792.
Open Access Artículo
36 - Taboada,B., Zarate,S., Garcia-Lopez,R., Munoz-Medina,J.E., Sanchez-Flores,A., Herrera-Estrella,A., Boukadida,C., Gomez-Gil,B., Selem-Mojica N., Rosales-Rivera,M., Salas-Lais,A.G., Gutierrez-Rios,R.M., Loza,A., Rivera-Gutierrez,X., Vazquez-Perez,J.A., Avila-Rios,S., Hurtado,J.M., Herrera-Najera,C.I., Nunez-Contreras,J.J., Sarquiz-Martinez,B, Garcia-Arias,V.E., Santiago-Mauricio,M.G., Martinez-Miguel,B., Enciso-Ibarra,J., Chaidez-Quiroz,C., Isa,P., Wong-Chew,R.M., Jimenez-Corona,M.E., Lopez,S., Arias,C.F.. Dominance of Three Sublineages of the SARS-CoV-2 Delta Variant in Mexico. Viruses, 14 (6), 1165.
Open Access Artículo
37 - Zarate,S., Taboada,B., Munoz-Medina,J.E., Isa,P., Sanchez-Flores,A., Boukadida,C., Herrera-Estrella,A., Selem-Mojica N., Rosales-Rivera,M., Gomez-Gil,B., Salas-Lais,A.G., Santacruz-Tinoco,C.E., Montoya-Fuentes,H., ALvarado-Yaah,J.E., Molina-Salinas,G.M., Espinoza-Ayala,G.E., Enciso-Moreno,J.A., Gutierrez-Rios,R.M., Loza,A., Moreno-Contreras,J., Garcia-Lopez,R., Rivera-Gutierrez,X., Comas-Garcia,A., Wong-Chew,R.M., Jimenez-Corona,M.E., del Angel,R.M., Vazquez-Perez,J.A., Matias-Florentino,M., Perez-Garcia,M., Avila-Rios,S., Castelan-Sanchez,H.G., Delaye,L., Martinez-Castilla,L.P., Escalera-Zamudio,M., Lopez,S., Arias,C.F.. The Alpha Variant (B.1.1.7) of SARS-CoV-2 Failed to Become Dominant in Mexico. Microbiology Spectrum, 10 (2), e0224021.
Preprint
38 - Garcia-Lopez,R., Rivera-Gutierrez,X., Rosales-Rivera,M., Taboada,B., Zarate,S., Munoz-Medina,J.E., Roche,B., Herrera-Estrella,A., Gomez-Gil,B., Sanchez-Flores,A., Arias,C.F.. SARS-CoV-2 BW.1, a fast-growing Omicron variant from southeast Mexico bearing relevant escape mutations. Research Square, Preprint 21 Nov.
Open Access Artículo
Open Access Artículo
42 - Garcia-Lopez,R., Cornejo-Granados,F., Lopez-Zavala,A.A., Sanchez-Lopez,F., Cota-Huizar,A., Sotelo-Mundo,R.R., Guerrero,A., Mendoza-Vargas,A., Gomez-Gil,B., Ochoa-Leyva,A.. Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota. Microorganisms, 8 (1).
Open Access Artículo
43 - Mendez-Perez,R., Garcia-Lopez,R., Bautista-Lopez,J.S., Vazquez-Castellanos,J., Alvarez-Gonzalez,C., Pena-Marin,E., Baltierra-Trejo,E., Adams-Schroeder,R., Dominguez-Rodriguez,V., Melgar-Valdes,C., Martinez-Garcia,R., Moya,A., Gomez-Cruz,R.. High-throughput sequencing of the 16S rRNA gene to analyze the gut microbiome in juvenile and adult tropical gar (Atractosteus tropicus). Latin American Journal of Aquatic Research, 48 (3), 456-479. *
Open Access Artículo
44 - Amaretti,A., Gozzoli,C., Simone,M., Raimondi,S., Righini,L., Perez-Brocal,V., Garcia-Lopez,R., Moya,A., Rossi,M.. Profiling of Protein Degraders in Cultures of Human Gut Microbiota. Frontiers in Microbiology, 10. *
Open Access Revisión
45 - Garcia-Lopez,R., Perez-Brocal,V., Moya,A.. Beyond cells - The virome in the human holobiont. Microbial Cell, 6 (9), 373-396. *
Open Access Artículo
47 - Garcia-Lopez,R., Vazquez-Castellanos,J.F., Moya,A.. Fragmentation and coverage variation in viral metagenome assemblies, and their effect in diversity calculations. Frontiers in Bioengineering and Biotechnology, 3, 141. *
Open Access Artículo
Artículo
49 - Garcia-Lopez,R., Moya,A., Bagan,J.V., Perez-Brocal,V.. Retrospective case-control study of viral pathogen screening in proliferative verrucous leukoplakia lesions. Clinical Otolaryngology, 39 (5), 272-280. *
Open Access Revisión
50 - Gonzalez-Candelas,F., Bracho,M.A., Comas,I., Auria,G.D., Dzunkova,M., Garcia,R., Gosalbes,M.J., Isaac,S., Latorre,A., Lopez-Labrador,F.X., Galindo,J.A.P., Palero,F., Perez-Brocal,V., Perez-Cobas,A.E., Sanchez-Buso,L., Silva,F.J., Vazquez-Castellanos,J.F., Moya,A.. Estudios de epidemiología molecular en población inmigrante en España. Revista Espanola de Salud Publica, 88 (6), 819-828. *
Open Access Artículo
51 - Vazquez-Castellanos,J.F., Garcia-Lopez,R., Perez-Brocal,V., Pignatelli,M., Moya,A.. Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut. BMC Genomics, 15, 37. *
Articulo
52 - Perez-Brocal,V., Garcia-Lopez,R., Vazquez-Castellanos,J.F., Nos,P., Beltran,B., Latorre,A., Moya,A.. Study of the Viral and Microbial Communities Associated With Crohn's Disease: A Metagenomic Approach. Clinical and Translational Gastroenterology, 4, e36. *
Artículo
53 - Garcia-Lopez,R., Perez-Brocal,V., Diez-Domingo,J., Moya,A.. Gut Microbiota in Children Vaccinated with Rotavirus Vaccine. Pediatric Infectious Disease Journal, 31 (12), 1300-1302. *
Open Access Artículo
54 - Quinto-Cortes,C.D., Arriola,L.A., Garcia-Hughes,G., Garcia-Lopez,R., Molina,D.P., Flores,M., Palacios,R., Pinero,D.. Genetic Characterization of Indigenous Peoples from Oaxaca, Mexico, and Its Relation to Linguistic and Geographic Isolation. Human BiologyHum.Biol., 82 (4), 409-432. *