Shirley Bikel
Ex-colaborador y/o ex-alumnoEstudiante
* Indica publicación con otra institución de adscripción
Total de publicaciones: 9
- Tipo
- Fecha
Artículo in press
1 - Gallardo-Becerra,L., Cornejo-Granados,F., Bikel,S., Arenas,I., Lopez-Leal,G., Alvarado-Gonzalez,C., Sanchez-Lopez,F., Manzo,R., Corzo,G., Espino-Solis,G.P., Canizales-Quinteros,S., Ochoa-Leyva,A. (2025). Bioactive Plasmid- and Phage-Encoded Antimicrobial Peptides (AMPs) in the Human Gut: A Metatranscriptome-Virome Profiling Reveals Exploratory Links to Metabolic Human Diseases.
Microbial Ecology,
Nov 28 [Online ahead of print].
Artículo
2 - Bikel,S., Gallardo-Becerra,L., Cornejo-Granados,F., Ochoa-Leyva,A. (2022). Protocol for the isolation, sequencing, and analysis of the gut phageome from human fecal samples.
STAR Protocols,
3 (1),
101170.
Artículo
3 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Garcia-Lopez,R., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Hernandez-Reyna,A., Mendoza-Vargas,A., Ochoa-Leyva,A. (2021). Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome.
iScience,
24 (8),
102900.
Artículo
4 - Gallardo-Becerra,L., Cornejo-Granados,F., Garcia-Lopez,R., Valdez-Lara,A., Bikel,S., Canizales-Quinteros,S., Lopez-Contreras,B.E., Mendoza-Vargas,A., Nielsen,H., Ochoa-Leyva,A. (2020). Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children.
Microbial Cell Factories,
19 (1),
61.
Artículo
5 - Bikel, S., Jacobo-Albavera, L., Sanchez-Munoz, F., Cornejo-Granados, F., Canizales-Quinteros, S., Soberon, X., Sotelo-Mundo, R.R., Del Rio-Navarro, B.E., Mendoza-Vargas, A., Sanchez, F., Ochoa-Leyva, A. (2017). A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data.
PeerJ,
5,
e4133.
Revisión
6 - Bikel,S., Valdez-Lara,A., Cornejo-Granados,F., Rico,K., Canizales-Quinteros,S., Soberon,X., Del Pozo-Yauner,L., Ochoa-Leyva,A. (2015). Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome.
Computational and Structural Biotechnology Journal,
13,
390-401.
Preprint
7 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Ochoa-Leyva,A. (2020). Gut Phageome Analysis Reveals Disease-Specific Hallmarks in Childhood Obesity.
bioRxiv,
Preprint posted July 30.
8 - Bikel, Shirley (2021). El papel del viroma en el microbioma intestinal asociado a la obesidad con complicaciones metabólicas en población infantil mexicana.
Facultad de Química,
Doctorado en Investigacion Clinica Experimental en Salud,
UNAM.
Asesor: Ochoa Leyva, Adrian
9 - Bikel, Shirley (2014). Identificacion de genes candidato en mieloma multiple mediante enfoques de estructura-funcion de proteinas e integracion de omicas .
Maestra en Investigacion Clinica Experimental en Salud,
UNAM.
*
Asesor: Ochoa Leyva, Adrian
Artículo in press
10 - Gallardo-Becerra,L., Cornejo-Granados,F., Bikel,S., Arenas,I., Lopez-Leal,G., Alvarado-Gonzalez,C., Sanchez-Lopez,F., Manzo,R., Corzo,G., Espino-Solis,G.P., Canizales-Quinteros,S., Ochoa-Leyva,A.. Bioactive Plasmid- and Phage-Encoded Antimicrobial Peptides (AMPs) in the Human Gut: A Metatranscriptome-Virome Profiling Reveals Exploratory Links to Metabolic Human Diseases.
Microbial Ecology,
Nov 28 [Online ahead of print].
Artículo
11 - Bikel,S., Gallardo-Becerra,L., Cornejo-Granados,F., Ochoa-Leyva,A.. Protocol for the isolation, sequencing, and analysis of the gut phageome from human fecal samples.
STAR Protocols,
3 (1),
101170.
Artículo
12 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Garcia-Lopez,R., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Hernandez-Reyna,A., Mendoza-Vargas,A., Ochoa-Leyva,A.. Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome.
iScience,
24 (8),
102900.
13 - Bikel, Shirley. El papel del viroma en el microbioma intestinal asociado a la obesidad con complicaciones metabólicas en población infantil mexicana.
Facultad de Química,
Doctorado en Investigacion Clinica Experimental en Salud,
UNAM.
Asesor: Ochoa Leyva, Adrian
Artículo
14 - Gallardo-Becerra,L., Cornejo-Granados,F., Garcia-Lopez,R., Valdez-Lara,A., Bikel,S., Canizales-Quinteros,S., Lopez-Contreras,B.E., Mendoza-Vargas,A., Nielsen,H., Ochoa-Leyva,A.. Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children.
Microbial Cell Factories,
19 (1),
61.
Preprint
15 - Bikel,S., Lopez-Leal,G., Cornejo-Granados,F., Gallardo-Becerra,L., Sanchez,F., Equihua-Medina,E., Ochoa-Romo,J.P., Lopez-Contreras,B.E., Canizales-Quinteros,S., Ochoa-Leyva,A.. Gut Phageome Analysis Reveals Disease-Specific Hallmarks in Childhood Obesity.
bioRxiv,
Preprint posted July 30.
Artículo
16 - Bikel, S., Jacobo-Albavera, L., Sanchez-Munoz, F., Cornejo-Granados, F., Canizales-Quinteros, S., Soberon, X., Sotelo-Mundo, R.R., Del Rio-Navarro, B.E., Mendoza-Vargas, A., Sanchez, F., Ochoa-Leyva, A.. A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data.
PeerJ,
5,
e4133.
Revisión
17 - Bikel,S., Valdez-Lara,A., Cornejo-Granados,F., Rico,K., Canizales-Quinteros,S., Soberon,X., Del Pozo-Yauner,L., Ochoa-Leyva,A.. Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome.
Computational and Structural Biotechnology Journal,
13,
390-401.
18 - Bikel, Shirley. Identificacion de genes candidato en mieloma multiple mediante enfoques de estructura-funcion de proteinas e integracion de omicas .
Maestra en Investigacion Clinica Experimental en Salud,
UNAM.
*
Asesor: Ochoa Leyva, Adrian