Dr. Paul Hernández Herrera
Postdoctoral de Proyecto

Total de publicaciones: 23
  • Tipo
  • Fecha
Open Access Artículo
Artículo
3 - Hernandez-Herrera,P., Ugartechea-Chirino,Y., Torres-Martinez,H.H., Arzola,A.V., Chairez-Veloz,J.E., Garcia-Ponce,B., de la Paz Sanchez,M., Garay-Arroyo,A., Alvarez-Buylla,E.R., Dubrovsky,J.G., Corkidi,G. (2022). Live Plant Cell Tracking: Fiji plugin to analyze cell proliferation dynamics and understand morphogenesis. Plant Physiology, 188 (2), 846-860.
Revisión
5 - Mata-Martinez,E., Sanchez-Cardenas,C., Chavez,J.C., Guerrero,A., Trevino,C.L., Corkidi,G., Montoya,F., Hernandez-Herrera,P., Buffone,M.G., Balestrini,P.A., Darszon,A. (2021). Role of calcium oscillations in sperm physiology. Biosystems, 209, 104524 [correction 104546].
Artículo
9 - Hernandez-Herrera, P., Montoya, F., Rendon-Mancha, J.M., Darszon, A., Corkidi, G. (2018). 3D+t Human Sperm Flagellum Tracing in low SNR Fluorescence Images. IEEE Transactions on Medical Imaging, 37 (10), 2236-2247.
Artículo
10 - Singh, P.K., Hernandez-Herrera, P., Labate, D., Papadakis, M. (2017). Automated 3-D Detection of Dendritic Spines from In Vivo Two-Photon Image Stacks. Neuroinformatics, 15 (4), 303-319.
Artículo
11 - Hernandez-Herrera,P., Papadakis,M., Kakadiaris,I.A. (2016). Multi-Scale Segmentation of Neurons Based on One-Class Classification. Journal of Neuroscience Methods, 266, 94-106. *
Artículo
12 - Santamaria-Pang,A., Hernandez-Herrera,P., Papadakis,M., Saggau,P., Kakadiaris,I.A. (2015). Automatic Morphological Reconstruction of Neurons from Multiphoton and Confocal Microscopy Images Using 3D Tubular Models. Neuroinformatics, 13 (3), 297-320. *
Memoria in extenso
13 - Bribiesca-Sanchez,A., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Darszon,A., Corkidi,G. (2023). Artifacts Generated by the 3D Rotation of a Freely-Swimming Human Sperm in the Measurement of Intracellular Ca2+. XLV Mexican Conference on Biomedical Engineering. CNIB 2022. IFMBE Proceedings, vol 86. 355-362, Cham: Springer International Publishing.
Memoria in extenso
14 - Bribiesca,J., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2019). Metodología para el análisis 3D de la evaporación y sedimentación de una gota de agua. SOMI XXXIV Congreso de Instrumentación Morelia, Michoacán, México, 16 al 18 de octubre de 2019. .
Memoria in extenso
15 - Bribiesca-Sanchez,J.A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2018). Sistema de microscopía tridimensional para muestreo rápido y Time Lapse simultáneamente. SOMI XXXIII Congreso de Instrumentación, Torreón, Coahuila, México, del 29 al 31 de Octubre de 2018. Mexico: SOMI.
Memoria in extenso
16 - Hernandez-Herrera, P., Montoya, F., Rendon, J. M., Darszon, A., Corkidi, G. (2017). Sperm Flagellum Center-Line Tracing in Fluorescence 3D+t Low SNR Stacks Using an Iterative Minimal Path Method. Image Analysis and Recognition: 14th International Conference, ICIAR 2017, Montreal, QC, Canada, July 5-7, 2017, Proceedings. Lecture Notes in Computer Science book series , 437-445, Cham.
Memoria in extenso
17 - Hernandez-Herrera,P., Papadakis,M., Kakadiaris,I.A. (2014). Segmentation of neurons based on one-class classification. 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. 1316-1319. *
Internacional
18 - Hernandez-Herrera,P., Jimenez,D., Kakadiaris,I.A., Koutsogiannis,A., Labate,D., Laezza,F., Papadakis,M. (2013). A Harmonic Analysis View on Neuroscience Imaging. Excursions in Harmonic Analysis, Volume 2. Applied and Numerical Harmonic Analysis, 423-450. *
memoria in extenso
20 - Hernandez,H.O., Hernandez-Herrera,P., Montoya,F., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G. (2022). 3D+t feature-based descriptor for unsupervised flagellar human sperm beat classification. Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2022, 488-492.
Open Access Memoria in extenso
21 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G. (2021). Análisis de la dinámica tridimensional de evaporación de gotas sésiles de interés biomédico. Memorias Del Congreso Nacional De Ingeniería Biomédica, 8 (1), 69-72.
Open Access Preprint
23 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G. (2019). The human sperm beats anisotropically and asymmetrically in 3D. bioRxiv, Preprint posted October 05, 2019, 795245.
Memoria in extenso
24 - Bribiesca-Sanchez,A., Montoya,F., Gonzalez-Cota,A.L., Hernandez-Herrera,P., Darszon,A., Corkidi,G.. Artifacts Generated by the 3D Rotation of a Freely-Swimming Human Sperm in the Measurement of Intracellular Ca2+. XLV Mexican Conference on Biomedical Engineering. CNIB 2022. IFMBE Proceedings, vol 86. 355-362, Cham: Springer International Publishing.
Artículo
Open Access Artículo
Artículo
27 - Hernandez-Herrera,P., Ugartechea-Chirino,Y., Torres-Martinez,H.H., Arzola,A.V., Chairez-Veloz,J.E., Garcia-Ponce,B., de la Paz Sanchez,M., Garay-Arroyo,A., Alvarez-Buylla,E.R., Dubrovsky,J.G., Corkidi,G.. Live Plant Cell Tracking: Fiji plugin to analyze cell proliferation dynamics and understand morphogenesis. Plant Physiology, 188 (2), 846-860.
Preprint
memoria in extenso
29 - Hernandez,H.O., Hernandez-Herrera,P., Montoya,F., Olveres,J., Bloomfield-Gadelha,H., Darszon,A., Escalante-Ramirez,B., Corkidi,G.. 3D+t feature-based descriptor for unsupervised flagellar human sperm beat classification. Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2022, 488-492.
Artículo
Revisión
31 - Mata-Martinez,E., Sanchez-Cardenas,C., Chavez,J.C., Guerrero,A., Trevino,C.L., Corkidi,G., Montoya,F., Hernandez-Herrera,P., Buffone,M.G., Balestrini,P.A., Darszon,A.. Role of calcium oscillations in sperm physiology. Biosystems, 209, 104524 [correction 104546].
Open Access Memoria in extenso
32 - Bribiesca,A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Análisis de la dinámica tridimensional de evaporación de gotas sésiles de interés biomédico. Memorias Del Congreso Nacional De Ingeniería Biomédica, 8 (1), 69-72.
Memoria in extenso
37 - Bribiesca,J., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Metodología para el análisis 3D de la evaporación y sedimentación de una gota de agua. SOMI XXXIV Congreso de Instrumentación Morelia, Michoacán, México, 16 al 18 de octubre de 2019. .
Open Access Preprint
38 - Gadelha,H., Hernandez-Herrera,P., Montoya,F., Darszon,A., Corkidi,G.. The human sperm beats anisotropically and asymmetrically in 3D. bioRxiv, Preprint posted October 05, 2019, 795245.
Artículo
39 - Hernandez-Herrera, P., Montoya, F., Rendon-Mancha, J.M., Darszon, A., Corkidi, G.. 3D+t Human Sperm Flagellum Tracing in low SNR Fluorescence Images. IEEE Transactions on Medical Imaging, 37 (10), 2236-2247.
Memoria in extenso
40 - Bribiesca-Sanchez,J.A., Montoya,F., Hernandez,P., Ramos,E., Corkidi,G.. Sistema de microscopía tridimensional para muestreo rápido y Time Lapse simultáneamente. SOMI XXXIII Congreso de Instrumentación, Torreón, Coahuila, México, del 29 al 31 de Octubre de 2018. Mexico: SOMI.
Artículo
41 - Singh, P.K., Hernandez-Herrera, P., Labate, D., Papadakis, M.. Automated 3-D Detection of Dendritic Spines from In Vivo Two-Photon Image Stacks. Neuroinformatics, 15 (4), 303-319.
Memoria in extenso
42 - Hernandez-Herrera, P., Montoya, F., Rendon, J. M., Darszon, A., Corkidi, G.. Sperm Flagellum Center-Line Tracing in Fluorescence 3D+t Low SNR Stacks Using an Iterative Minimal Path Method. Image Analysis and Recognition: 14th International Conference, ICIAR 2017, Montreal, QC, Canada, July 5-7, 2017, Proceedings. Lecture Notes in Computer Science book series , 437-445, Cham.
Artículo
43 - Hernandez-Herrera,P., Papadakis,M., Kakadiaris,I.A.. Multi-Scale Segmentation of Neurons Based on One-Class Classification. Journal of Neuroscience Methods, 266, 94-106. *
Artículo
44 - Santamaria-Pang,A., Hernandez-Herrera,P., Papadakis,M., Saggau,P., Kakadiaris,I.A.. Automatic Morphological Reconstruction of Neurons from Multiphoton and Confocal Microscopy Images Using 3D Tubular Models. Neuroinformatics, 13 (3), 297-320. *
Memoria in extenso
45 - Hernandez-Herrera,P., Papadakis,M., Kakadiaris,I.A.. Segmentation of neurons based on one-class classification. 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. 1316-1319. *
Internacional
46 - Hernandez-Herrera,P., Jimenez,D., Kakadiaris,I.A., Koutsogiannis,A., Labate,D., Laezza,F., Papadakis,M.. A Harmonic Analysis View on Neuroscience Imaging. Excursions in Harmonic Analysis, Volume 2. Applied and Numerical Harmonic Analysis, 423-450. *