Dr. Cuauhtémoc Licona Cassani
Investigador Titular A Tiempo Completo
Análisis de diversidad genética, metabólica y microbiana de ambientes con aplicaciones biotecnológicas
Biología sintética
Desarrollo de biosensores
Ingeniería metabólica
Doctorado, Dr. en Filosofía
* Indica publicación con otra institución de adscripción
Total de publicaciones: 63
- Tipo
- Fecha
Artículo
1 - Corona-Cervantes,K., Urrutia-Baca,V.H., Gamez-Valdez,J.S., Jimenez-Lopez,B., Rodriguez-Gutierrez,N.A., Chavez-Caraza,K., Espiricueta-Candelaria,F., Salas-Villalobos,U.A., Ramos-Parra,P.A., Gutierrez-Uribe,J.A., Brunck,M., Chuck-Hernandez,C., Licona-Cassani,C. (2026). Maternal obesity alters human milk oligosaccharides content and correlates with early acquisition of late colonizers in the neonatal gut microbiome.
Gut Microbes,
18 (1),
2607043.
Artículo
2 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E. (2025). Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
3 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C. (2025). Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
4 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
5 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C. (2025). Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
6 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L (2025). Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
7 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C. (2025). Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
8 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C. (2025). FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
9 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C. (2025). Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557 [corrigendum vol 12 (2)].
Artículo
10 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C. (2025). CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
11 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C. (2025). Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
12 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C. (2025). Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
*
Artículo
13 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J. (2025). MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Artículo
14 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I. (2024). Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
15 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I. (2024). Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
*
Artículo
16 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R. (2024). Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
17 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N. (2024). Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
*
Artículo
18 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A. (2024). Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
19 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S. (2024). Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
20 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C. (2024). Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
21 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C. (2024). Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
22 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C. (2024). microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
*
Artículo
23 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C. (2023). Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
*
Artículo
24 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C. (2023). Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
25 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L. (2023). A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
*
Artículo
26 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C. (2023). Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
*
Artículo
27 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C. (2023). Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
*
Artículo
28 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C. (2023). Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Artículo
29 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R. (2022). SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
30 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G. (2022). A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
*
Artículo
31 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A. (2022). Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
*
Artículo
32 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K. (2021). Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
*
Artículo
33 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
*
Artículo
34 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C. (2021). Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
35 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R. (2021). Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
*
Artículo
36 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G. (2021). Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
*
Artículo
37 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C. (2021). Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
Revisión
38 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L. (2020). Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
39 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C. (2020). Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
*
Artículo
40 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G. (2020). Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
41 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I. (2020). The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
42 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C. (2020). Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
*
Artículo
43 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E. (2020). Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Artículo
44 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J. (2019). Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
45 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F. (2017). Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
46 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F. (2017). Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
47 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J. (2017). Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
48 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E. (2016). Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
41,
113-124.
*
Artículo
49 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K. (2016). Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
50 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S. (2016). Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
51 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E. (2015). Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
52 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E. (2015). AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
53 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C. (2014). Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
54 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G. (2014). Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
55 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K. (2014). Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
56 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H. (2014). Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
57 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K. (2013). Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
58 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K. (2013). Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
59 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K. (2012). Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
60 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A. (2012). Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.
Internacional
61 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R. (2023). Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
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Preprint
62 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N. (2025). Uncharacterized Acetilactobacillus -like genera represent the most abundant microorganisms in honeys produced by native stingless bee.
bioRxiv,
Preprint posted June 27.
*
Preprint
63 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F. (2020). Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
64 - Corona-Cervantes,K., Urrutia-Baca,V.H., Gamez-Valdez,J.S., Jimenez-Lopez,B., Rodriguez-Gutierrez,N.A., Chavez-Caraza,K., Espiricueta-Candelaria,F., Salas-Villalobos,U.A., Ramos-Parra,P.A., Gutierrez-Uribe,J.A., Brunck,M., Chuck-Hernandez,C., Licona-Cassani,C.. Maternal obesity alters human milk oligosaccharides content and correlates with early acquisition of late colonizers in the neonatal gut microbiome.
Gut Microbes,
18 (1),
2607043.
Artículo
65 - Alvarado-Pena,N., Munoz-Torrico,M., Narvaez-Diaz,L., Mejia-Ponce,P.M, Becerril-Vargas,E., Zuniga,J., Muniz-Salazar,R., Laniado-Laborin,R., Licona-Cassani,C., Soberon,X., Silva-Herzog,E.. Mycobacterium tuberculosis genomic surveillance in Mexico. Characterization of variants in drug resistance and efflux pump genes.
Frontiers in Microbiology,
16,
1666838.
Artículo
66 - Elakkya,M., Gonzalez-Salazar,L.A., Lopez-Reyes,K., Rebelo-Romao,I., Sousa,A., Godde,V., Niehaus,K., Thenappan,D.P., Vilchez,J.I., Paul,S., Licona-Cassani,C.. Comparative genomics and metabolomics reveal phytohormone production, nutrient acquisition, and osmotic stress tolerance in Azotobacter chroococcum W5.
Frontiers in Microbiology,
16,
1626016.
Artículo
67 - Gallardo-Camarena,M.V., Reverchon,F., Mendez-Bravo,A., Torres-Acosta,M.A., Licona-Cassani,C.. Control of avocado anthracnose by carposphere-associated Kosakonia cowanii VG1 for agricultural applications.
AMB Express,
15 (1).
*
Artículo
68 - Gallardo-Camarena,M.V., Torres-Acosta,M.A., Licona-Cassani,C.. Economic evaluation of large-scale production for Colletotrichum antagonists as biocontrol agents against anthracnose.
Journal of Chemical Technology and Biotechnology,
100 (5),
1117-1128.
*
Artículo
69 - Morey-Leon,G., Mejia-Ponce,P.M., Fernandez-Cadena,J.C, Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Fresia,P, Berna,L. Global epidemiology of Mycobacterium tuberculosis lineage 4 insights from Ecuadorian genomic data.
Scientific Reports,
15 (1).
*
Artículo
70 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Gonzalez-Valdez,J., Aguilar,O., Renard,C.M.G.C., Licona-Cassani,C.. Influence of molar ratio and pH on physicochemical characteristics of genipin-derived pigments formed at cold and mild temperatures.
Food Chemistry Advances,
7,
100983.
*
Artículo
71 - Ramos-Garcia,A.A., Mejia-Ponce,P.M., Salem-Mojica,N., Santos-Diaz,A., Martinez-Ledesma,E., Licona-Cassani,C.. FuNTB: a functional network clustering tool for the analysis of genome-wide genetic variants in Mycobacterium tuberculosis.
Bioinformatics,
41 (7),
btaf341.
Artículo
72 - Rodriguez-Orduna,L., Aguilar,C., Hernandez-Melgar,A.G., Arocha-Garza,H.F., Verdel-Aranda,K., Vazquez-Rodriguez,A., Lopez-Ribot,J.L., Moreno-Ulloa,A., Licona-Cassani,C.. Biodiscovery of Actinomycetota through metabolo-genomics reveals functional diversity across contrasting Mexican ecosystems.
Microbial Genomics,
11 (10),
001557 [corrigendum vol 12 (2)].
Artículo
73 - Salazar-Garcia,L.M., Damas-Ramos,L.C., Trejo-Alarcon,L.M., Rago,D., Ahonen,L., Cruz-Morales,P., Ponce-Noyola,P., Licona-Cassani,C.. CRISPR-driven enhanced hydrocarbon emulsification in an environmental Pseudomonas aeruginosa strain.
Microbial Cell Factories,
24 (1),
151.
Artículo
74 - Trejo-Alarcon,L.M., Cano-Prieto,C., Calheiros de Carvalho,A., Rago,D., Ahonen,L., Cruz-Morales,P., Licona-Cassani,C.. Integrative metabolo-genomics suggests a biosynthetic pathway for tetrangulol in Streptomyces sp. KL110A.
World Journal of Microbiology & Biotechnology,
41 (3).
*
Artículo
75 - Trejo-Alarcon,L.M., Cruz-Morales,P., Licona-Cassani,C.. Draft genome sequence of Streptomyces sp. CC302I with non-canonical biosynthetic gene clusters for codon-readthrough activity.
Microbiology Resource Announcements,
14 (2).
*
Artículo
76 - Zdouc,M.M., Blin,K., Louwen,N.L.L., Navarro,J., Loureiro,C., Bader,C.D., Bailey,C.B., Barra,L., Booth,T.J., Bozhuyuk,K.A.J., Cediel-Becerra,J.D.D., Charlop-Powers,Z., Chevrette,M.G., Chooi,Y.H., D'Agostino,P.M., de Rond T., Del Pup E., Duncan,K.R., Gu,W., Hanif,N., Helfrich,E.J.N., Jenner,M., Katsuyama,Y., Korenskaia,A., Krug,D., Libis,V., Lund,G.A., Mantri,S., Morgan,K.D., Owen,C., Phan,C.S., Philmus,B., Reitz,Z.L., Robinson,S.L., Singh,K.S., Teufel,R., Tong,Y., Tugizimana,F., Ulanova,D., Winter,J.M., Aguilar,C., Akiyama,D.Y., Al-Salihi,S.A.A., Alanjary,M., Alberti,F., Aleti,G., Alharthi,S.A., Rojo,M.Y.A., Arishi,A.A., Augustijn,H.E., Avalon,N.E., Avelar-Rivas,J.A., Axt,K.K., Barbieri,H.B., Barbosa,J.C.J., Barboza Segato,L.G., Barrett,S.E., Baunach,M., Beemelmanns,C., Beqaj,D., Berger,T., Bernaldo-Aguero,J., Bettenbuhl,S.M., Bielinski,V.A., Biermann,F., Borges,R.M., Borriss,R., Breitenbach,M., Bretscher,K.M., Brigham,M.W., Buedenbender,L., Bulcock,B.W., Cano-Prieto,C., Capela,J., Carrion,V.J., Carter,R.S., Castelo-Branco,R., Castro-Falcon,G., Chagas,F.O., Charria-Giron,E., Chaudhri,A.A., Chaudhry,V., Choi,H., Choi,Y., Choupannejad,R., Chromy,J., Donahey,M.S.C., Collemare,J., Connolly,J.A., Creamer,K.E., Crusemann,M., Cruz,A.A., Cumsille,A., Dallery,J.F., Damas-Ramos,L.C., Damiani,T., de Kruijff M., Martin,B.D., Sala,G.D., Dillen,J., Doering,D.T., Dommaraju,S.R., Durusu,S., Egbert,S., Ellerhorst,M., Faussurier,B., Fetter,A., Feuermann,M., Fewer,D.P., Foldi,J., Frediansyah,A., Garza,E.A., Gavriilidou,A., Gentile,A., Gerke,J., Gerstmans,H., Gomez-Escribano,J.P., Gonzalez-Salazar,L.A., Grayson,N.E., Greco,C., Gomez,J.E.G., Guerra,S., Flores,S.G., Gurevich,A., Gutierrez-Garcia,K., Hart,L., Haslinger,K., He,B., Hebra,T., Hemmann,J.L., Hindra,H., Hoing,L., Holland,D.C., Holme,J.E., Horch,T., Hrab,P., Hu,J., Huynh,T.H., Hwang,J.Y., Iacovelli,R., Iftime,D., Iorio,M., Jayachandran,S., Jeong,E., Jing,J., Jung,J.J., Kakumu,Y., Kalkreuter,E., Kang,K.B., Kang,S., Kim,W., Kim,G.J., Kim,H., Kim,H.U., Klapper,M., Koetsier,R.A., Kollten,C., Kovacs,A.T., Kriukova,Y., Kubach,N., Kunjapur,A.M., Kushnareva,A.K., Kust,A., Lamber,J., Larralde,M., Larsen,N.J., Launay,A.P., Le,N.T., Lebeer,S., Lee,B.T., Lee,K., Lev,K.L., Li,S.M., Li,Y.X., Licona-Cassani,C., Lien,A., Liu,J., Lopez,J.A.V., Machushynets,N.V., Macias,M.I., Mahmud,T., Maleckis,M., Martinez-Martinez,A.M., Mast,Y., Maximo,M.F., McBride,C.M., McLellan,R.M., Bhatt,K.M., Melkonian,C., Merrild,A., Metsa-Ketela,M., Mitchell,D.A., Muller,A.V., Nguyen,G.S., Nguyen,H.T., Niedermeyer,T.H.J., O'Hare,J.H., Ossowicki,A., Ostash,B.O., Otani,H., Padva,L., Paliyal,S., Pan,X., Panghal,M., Parade,D.S., Park,J., Parra,J., Rubio,M.P., Pham,H.T., Pidot,S.J., Piel,J., Pourmohsenin,B., Rakhmanov,M., Ramesh,S., Rasmussen,M.H., Rego,A., Reher,R., Rice,A.J., Rigolet,A., Romero-Otero,A., Rosas-Becerra,L.R., Rosiles,P.Y., Rutz,A., Ryu,B., Sahadeo,L.A., Saldanha,M., Salvi,L., Sanchez-Carvajal,E., Santos-Medellin,C., Sbaraini,N., Schoellhorn,S.M., Schumm,C., Sehnal,L., Selem,N., Shah,A.D., Shishido,T.K., Sieber,S., Silviani,V., Singh,G., Singh,H., Sokolova,N., Sonnenschein,E.C., Sosio,M., Sowa,S.T., Steffen,K., Stegmann,E., Streiff,A.B., Struder,A., Surup,F., Svenningsen,T., Sweeney,D., Szenei,J., Tagirdzhanov,A., Tan,B., Tarnowski,M.J.. MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Nucleic Acids Research,
53 (D1),
gkae1115,
D678-D690.
Preprint
77 - Xolalpa-Aroche,A., Contreras-Peruyero,H., Delgado-Suarez,E.J., Hernandez-Mena,D.I., Moguel-Chin,Wilson I., Rivero-Cruz,J.F., Velarde,R.A., Ortiz-Vazquez,E., Rivero-Cruz,B.E., Lovaco-Flores,J.A., Rodriguez-Orduna,L., Licona-Cassani,C., Barona-Gomez,F., Selem-Mojica,N.. Uncharacterized Acetilactobacillus -like genera represent the most abundant microorganisms in honeys produced by native stingless bee.
bioRxiv,
Preprint posted June 27.
*
Artículo
78 - Aguilar,C., Alwali,A., Mair,M., Rodriguez-Orduna,L., Contreras-Peruyero,H., Modi,R., Roberts,C., Selem-Mojica,N., Licona-Cassani,C., Parkinson,E.I.. Actinomycetota bioprospecting from ore-forming environments.
Microbial Genomics,
10 (5),
001253.
*
Artículo
79 - Alwali,A.Y., Santos,D., Aguilar,C., Birch,A., Rodriguez-Ordunea,L., Roberts,C.B., Modi,R., Licona-Cassani,C., Parkinson,E.I.. Discovery of Streptomyces species CS-62, a novel producer of the Acinetobacter baumannii selective antibiotic factumycin.
Journal of Industrial Microbiology & Biotechnology,
51,
kuae014.
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Artículo
80 - Bermudez-Hernandez,G.A., Perez-Martinez,D., Ortiz-Leon,M.C., Muniz-Salazar,R., Licona-Cassani,C., Zenteno-Cuevas,R.. Mutational Dynamics Related to Antibiotic Resistance in M. tuberculosis Isolates from Serial Samples of Patients with Tuberculosis and Type 2 Diabetes Mellitus.
Microorganisms,
12 (2).
*
Artículo
81 - Contreras-Peruyero,H., Guerrero-Flores,S., Zirion-Martinez,C., Mejia-Ponce,P.M., Navarro-Miranda,M., Lovaco-Flores,J.A., Ibarra-Rodriguez,J.M., Pashkov,A., Licona-Cassani,C., Selem-Mojica,N.. Meeting the challenge of genomic analysis: a collaboratively developed workshop for pangenomics and topological data analysis.
Bioinformatics Advances,
4 (1).
*
Artículo
82 - Deantas-Jahn,C., Mendoza,S.N., Licona-Cassani,C., Orellana,C., Saa,P.A.. Metabolic modeling of Halomonas campaniensis improves polyhydroxybutyrate production under nitrogen limitation.
Applied Microbiology and Biotechnology,
108 (1),
310.
*
Artículo
83 - Lozano-Aguirre,L., Avitia,M., Lappe-Oliveras,P., Licona-Cassani,C., Cevallos,M.A., Le Borgne,S.. Draft genomes of four Kluyveromyces marxianus isolates retrieved from the elaboration process of henequen (Agave fourcroydes) mezcal.
Microbiology Resource Announcements,
13 (3).
*
Artículo
84 - Mejia-Ponce,P.M., Chimal-Munoz,M., Zenteno-Cuevas,R., Licona-Cassani,C.. Draft genome sequences of 12 Mycolicibacterium fortuitum isolates from human pulmonary infections in Veracruz, Mexico.
Microbiology Resource Announcements,
13 (4).
*
Artículo
85 - Rodriguez-Orduna,L., Lara-Diaz,V.J., Alcorta-Garcia,M.R., Lopez-Villasenor,C.N., Licona-Cassani,C.. Genome sequences of 70 multidrug-resistant Gram-negative isolates in high-risk neonates in the Northeast of Mexico.
Microbiology Resource Announcements,
13 (9).
*
Artículo
86 - Zuffa,S., Schmid,R., Bauermeister,A., Gomes,P., Caraballo-Rodriguez,A.M., El Abiead,Y., Aron,A.T., Gentry,E.C., Zemlin,J., Meehan,M.J., Avalon,N.E., Cichewicz,R.H., Buzun,E., Terrazas,M.C., Hsu,C.Y., Oles,R., Ayala,A.V., Zhao,J., Chu,H., Kuijpers,M.C.M., Jackrel,S.L., Tugizimana,F., Nephali,L.P., Dubery,I.A., Madala,N.E., Moreira,E.A., Costa-Lotufo,L.V., Lopes,N.P., Rezende-Teixeira,P., Jimenez,P.C., Rimal,B., Patterson,A.D., Traxler,M.F., Pessotti,R.D.C., varado-Villalobos,D., Tamayo-Castillo,G., Chaverri,P., Escudero-Leyva,E., Quiros-Guerrero,L.M., Bory,A.J., Joubert,J., Rutz,A., Wolfender,J.L., Allard,P.M., Sichert,A., Pontrelli,S., Pullman,B.S., Bandeira,N., Gerwick,W.H., Gindro,K., Massana-Codina,J., Wagner,B.C., Forchhammer,K., Petras,D., Aiosa,N., Garg,N., Liebeke,M., Bourceau,P., Kang,K.B., Gadhavi,H., de Carvalho,L.P.S., Silva dos Santos,M., Perez-Lorente,A.I., Molina-Santiago,C., Romero,D., Franke,R., Bronstrup,M., Vera Ponce de Leon,A., Pope,P.B., La Rosa,S.L., La Barbera,G., Roager,H.M., Laursen,M.F., Hammerle,F., Siewert,B., Peintner,U., Licona-Cassani,C., Rodriguez-Orduna,L., Rampler,E., Hildebrand,F., Koellensperger,G., Schoeny,H., Hohenwallner,K., Panzenboeck,L., Gregor,R., O'Neill,E.C., Roxborough,E.T., Odoi,J., Bale,N.J., Ding,S., Sinninghe Damste,J.S., Guan,X.L., Cui,J.J., Ju,K.S., Silva,D.B., Silva,F.M.R., da Silva,G.F., Koolen,H.H.F., Grundmann,C., Clement,J.A., Mohimani,H., Broders,K., McPhail,K.L., Ober-Singleton,S.E., Rath,C.M., McDonald,D., Knight,R., Wang,M., Dorrestein,P.C.. microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data.
Nature Microbiology,
9 (2),
336-345.
*
Artículo
87 - Gonzalez-Salazar,L.A., Quezada,M., Rodriguez-Orduna,L., Ramos-Aboites,H., Capon,R.J., Souza-Saldivar,V., Barona-Gomez,F., Licona-Cassani,C.. Biosynthetic novelty index reveals the metabolic potential of rare actinobacteria isolated from highly oligotrophic sediments.
Microbial Genomics,
9 (1).
*
Artículo
88 - Mejia-Ponce,P.M., Ramos-Gonzalez,E.J., Ramos-Garcia,A.A., Lara-Ramirez,E.E., Soriano-Herrera,A.R., Medellin-Luna,M.F., Valdez-Salazar,F., Castro-Garay,C.Y., Nunez-Contreras,J.J., De Donato-Capote,M., Sharma,A., Castaneda-Delgado,J.E., Zenteno-Cuevas,R., Enciso-Moreno,J.A., Licona-Cassani,C.. Genomic epidemiology analysis of drug-resistant Mycobacterium tuberculosis distributed in Mexico.
PLoS ONE,
18 (10 October).
*
Artículo
89 - Morey-Leon,G., Mejia-Ponce,P.M., Granda Pardo,J.C., Munoz-Mawyin,K., Fernandez-Cadena,J.C., Garcia-Moreira,E., Andrade-Molina,D., Licona-Cassani,C., Berna,L.. A precision overview of genomic resistance screening in Ecuadorian isolates of Mycobacterium tuberculosis using web-based bioinformatics tools.
PLoS ONE,
18 (12 December).
*
Artículo
90 - Ramos-de-la-Pena,A.M., Santana-Reynoso,A., Renard,C.M.G.C., Contreras-Esquivel,J.C., Rodriguez-Rodriguez,J., Aguilar,O., Gonzalez-Valdez,J., Licona-Cassani,C.. Physical characterization of genipin complexes coupled with multivariate data analysis to assess formed pigments.
Colloids and Surfaces A: Physicochemical and Engineering Aspects,
673,
131774.
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Artículo
91 - Rodriguez-Sanchez,A.C., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Cumsille,A., Undabarrena,A., Camara,B., Selem-Mojica,N., Licona-Cassani,C.. Phylogenetic classification of natural product biosynthetic gene clusters based on regulatory mechanisms.
Frontiers in Microbiology,
14.
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92 - Urrutia-Baca,V.H., Chuck-Hernandez,C., Gutierrez-Uribe,J., Ramos-Parra,P.A., Licona-Cassani,C.. Development and validation of a versatile analytical method for absolute quantification of seven oligosaccharides in human, bovine, and goat milk.
Heliyon,
9 (11).
*
Internacional
93 - Perez-Martinez,D., Mejia-Ponce,P., Licona-Cassani,C., de Igartua,E., Bermudez,G., Viveros,D., Zenteno-Cuevas,R.. Drug Resistance in Tuberculosis: Mechanisms, Diagnosis, New Responses, and the Need for an Integrated Approach. Integrated Science.
331-359,
11.
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94 - Perez-Martinez,D.E., Bermudez-Hernandez,G.A., Madrazo-Moya,C.F., Cancino-Munoz,I., Montero,H., Licona-Cassani,C., Muniz-Salazar,R., Comas,I., Zenteno-Cuevas,R.. SNPs in Genes Related to DNA Damage Repair in Mycobacterium Tuberculosis: Their Association with Type 2 Diabetes Mellitus and Drug Resistance.
Genes,
13 (4).
*
Artículo
95 - Pineiro-Salvador,R., Vazquez-Garza,E., Cruz-Cardenas,J.A., Licona-Cassani,C., Garcia-Rivas,G., Moreno-Vasquez,J., Alcorta-Garcia,M.R., Lara-Diaz,V.J., Brunck,M.E.G.. A cross-sectional study evidences regulations of leukocytes in the colostrum of mothers with obesity.
BMC Medicine,
20 (1).
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Artículo
96 - Thenappan,D.P., Gonzalez-Salazar,L.A., Licona-Cassani,C., Kannepalli,A.. Draft Genome Sequence of Streptomyces sp. Strain FB2, Isolated from Rice Rhizosphere.
Microbiology Resource Announcements,
11 (6).
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Artículo
97 - Enriquez-Ochoa,D., Melendez-Martinez,D., Aguilar-Yanez,J.M., Licona-Cassani,C., Mayolo-Deloisa,K.. Development of aqueous two-phase systems-based approaches for the selective recovery of metalloproteases and phospholipases A2 toxins from Crotalus molossus nigrescens venom.
Bioresources and Bioprocessing,
8 (1).
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Artículo
98 - Flores-Gatica,M., Castaneda-Aponte,H., Gil-Garzon,M.R., Mora-Galvez,L.M., Banda-Magana,M.P., Jauregui-Jauregui,J.A., Torres-Acosta,M.A., Mayolo-Deloisa,K., Licona-Cassani,C.. Primary recovery of hyaluronic acid produced in Streptococcus equi subsp. zooepidemicus using PEG?_"citrate aqueous two-phase systems.
AMB Express,
11 (1),
123.
*
Artículo
99 - Gamez-Valdez,J.S., Garcia-Mazcorro,J.F., Montoya-Rincon,A.H., Rodriguez-Reyes,D.L., Jimenez-Blanco,G., Alanis-Rodriguez,M.T., Perez-Cabeza de Vaca,R., Alcorta-Garcia,M.R., Brunck,M., Lara-Diaz,V.J., Licona-Cassani,C.. Differential analysis of the bacterial community in colostrum samples from women with gestational diabetes mellitus and obesity.
Scientific Reports,
11 (1).
*
Artículo
100 - Jimenez-Ruano,A.C., Madrazo-Moya,C.F., Cancino-Munoz,I., Mejia-Ponce,P.M., Licona-Cassani,C., Comas,I., Muniz-Salazar,R., Zenteno-Cuevas,R.. Whole genomic sequencing based genotyping reveals a specific X3 sublineage restricted to Mexico and related with multidrug resistance.
Scientific Reports,
11 (1),
1870.
*
Artículo
101 - Maldonado-Arriaga,B., Sandoval-Jimenez,S., Rodriguez-Silverio,J., Alcaraz-Estrada,S.L., Cortes-Espinosa,T., Perez-Cabeza de Vaca,R., Licona-Cassani,C., Gomez-Valdez,J.S., Shaw,J., Mondragon-Teran,P., Hernandez-Cortez,C., Suarez-Cuenca,J.A., Castro-Escarpulli,G.. Gut dysbiosis and clinical phases of pancolitis in patients with ulcerative colitis.
Microbiologyopen,
10 (2).
*
Artículo
102 - Torres-Acosta,M.A., Castaneda-Aponte,H.M., Mora-Galvez,L.M., Gil-Garzon,M.R., Banda-Magana,M.P., Marcellin,E., Mayolo-Deloisa,K., Licona-Cassani,C.. Comparative Economic Analysis Between Endogenous and Recombinant Production of Hyaluronic Acid.
Frontiers in Bioengineering and Biotechnology,
9.
*
Revisión
103 - Avila-Rodriguez,M.I., Melendez-Martinez,D., Licona-Cassani,C., Aguilar-Yanez,J.M., Benavides,J., Sanchez,M.L.. Practical context of enzymatic treatment for wound healing: A secreted protease approach (review).
Biomedical Reports,
13 (1),
3-14.
*
Artículo
104 - Gallegos-Lopez,S., Mejia-Ponce,P.M., Gonzalez-Salazar,L.A., Rodriguez-Orduna,L., Souza-Saldivar,V., Licona-Cassani,C.. Draft Genome Sequence of Streptomyces sp. Strain C8S0, isolated from a highly oligotrophic sediment.
Microbiology Resource Announcements,
9 (14).
*
Artículo
105 - Garcia-Mazcorro,J.F., Kawas,J.R., Licona-Cassani,C., Mertens-Talcott,S., Noratto,G.. Different analysis strategies of 16S rRNA gene data from rodent studies generate contrasting views of gut bacterial communities associated with diet, health and obesity.
PeerJ,
8.
*
Artículo
106 - Garza-Aguilar,S.M., Garcia-Salinas,C., Mejia-Ponce,P.M, Licona-Cassani,C, Ramos-Parra,P.A, Diaz de la Garza,R.I.. The complexity of folate polyglutamylation in plants: Postharvest ripening and ethylene modulate polyglutamylated profiles in climacteric fruits plus systematic analysis of the glutamyl tail-editing enzymes.
Scientia Horticulturae,
273 (109588).
*
Artículo
107 - Melendez-Martinez,D., Plenge-Tellechea,L.F., Gatica-Colima,A., Cruz-Perez,M.S., Aguilar-Yanez,J.M., Licona-Cassani,C.. Functional mining of the crotalus spp. venom protease repertoire reveals potential for chronic wound therapeutics.
Molecules,
25 (15).
*
Artículo
108 - Orellana,C.A., Zaragoza,N.E., Licona-Cassani,C., Palfreyman,R.W., Cowie,N., Moonen,G., Moutafis,G., Power,J., Nielsen,L.K., Marcellin,E.. Time-course transcriptomics reveals that amino acids catabolism plays a key role in toxinogenesis and morphology in Clostridium tetani.
Journal of Industrial Microbiology & Biotechnology,
47 (12),
1059-1073.
*
Preprint
109 - Aguilar,C., Verdel-Aranda,K., Ramos-Aboites, H.E., Morales, M.A., Licona-Cassani,C., Barona-Gómez, F.. Convergent evolution of Streptomyces protease inhibitors involving a tRNA-mediated condensation-minus NRPS.
bioRxiv,
Posted October 28.
Artículo
110 - Khalil,Z.G., Cruz-Morales,P., Licona-Cassani,C., Marcellin,E., Capon,R.J.. Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.
ISME Journal,
13 (1),
147-158.
*
Artículo
111 - Cruz-Morales,P., Ramos-Aboites,H.E., Licona-Cassani,C., Selem-Mojica,N., Mejia-Ponce,P.M., Souza-Saldivar,V., Barona-Gomez,F.. Actinobacteria phylogenomics, selective isolation from an iron oligotrophic environment and siderophore functional characterization, unveil new desferrioxamine traits.
FEMS Microbiology Ecology,
93 (9).
*
Artículo
112 - Quezada,M., Licona-Cassani,C., Cruz-Morales,P., Salim,A.A., Marcellin,E., Capon,R.J., Barona-Gomez,F.. Diverse cone-snail species harbor closely related Streptomyces species with conserved chemical and genetic profiles, including polycyclic tetramic acid macrolactams.
Frontiers in Microbiology,
8 (NOV).
*
Artículo
113 - Steffani-Vallejo,J.L., Zuniga,C., Cruz-Morales,P., Lozano,L., Morales,M., Licona-Cassani,C., Revah,S., Utrilla,J.. Draft genome sequence of sphingobacterium sp. CZ-UAM, isolated from a methanotrophic consortium.
Genome Announcements,
5 (33).
*
Artículo
114 - Licona-Cassani,C., Steen,J.A., Zaragoza,N.E., Moonen,G., Moutafis,G., Hodson,M.P., Power,J., Nielsen,L.K., Marcellin,E.. Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.
41,
113-124.
*
Artículo
115 - Marcellin,E., Behrendorff,J.B., Nagaraju,S., Detissera,S., Segovia,S., Palfreyman,R.W., Daniell,J., Licona-Cassani,C., Quek,L.E., Speight,R., Hodson,M.P., Simpson,S.D., Mitchell,W.P., Kopke,M., Nielsen,L.K.. Low carbon fuels and commodity chemicals from waste gases-systematic approach to understand energy metabolism in a model acetogen.
Green Chemistry,
18 (10),
3020-3028.
*
Artículo
116 - Tierrafria,V.H., Licona-Cassani,C., Maldonado-Carmona,N., Romero-Rodriguez,A., Centeno-Leija,S., Marcellin,E., Rodriguez-Sanoja,R., Ruiz-Villafan,B., Nielsen,L.K., Sanchez,S.. Deletion of the hypothetical protein SCO2127 of Streptomyces coelicolor allowed identification of a new regulator of actinorhodin production.
Applied Microbiology and Biotechnology,
100 (21),
9229-9237 [Correction 104 (8) 3687].
*
Revisión
117 - Licona-Cassani,C., Cruz-Morales,P., Manteca,A., Barona-Gomez,F., Nielsen,L.K., Marcellin,E.. Systems Biology Approaches to Understand Natural Products Biosynthesis.
Frontiers in Bioengineering and Biotechnology,
3.
*
Artículo
118 - Navone,L., Macagno,J.P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Gramajo,H., Rodriguez,E.. AllR controls the expression of Streptomyces coelicolor allantoin pathway genes.
Applied and Environmental Microbiology,
81 (19),
6649-6659.
*
Artículo
119 - Liao,C., Rigali,S., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Ye,B.C.. Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.
Microbiology (United Kingdom),
160 (9),
1914-1928.
*
Artículo
120 - Licona-Cassani,C., Lara,A.R., Cabrera-Valladares,N., Escalante,A., Hernandez-Chavez,G., Martinez,A., Bolivar,F., Gosset,G.. Inactivation of Pyruvate Kinase or the Phosphoenolpyruvate: Sugar Phosphotransferase System Increases Shikimic and Dehydroshikimic Acid Yields from Glucose in Bacillus subtilis.
Journal of Molecular Microbiology and Biotechnology,
24 (1),
37-45.
Artículo
121 - Licona-Cassani,C., Lim,S., Marcellin,E., Nielsen,L.K.. Temporal dynamics of the saccharopolyspora erythraea phosphoproteome.
Molecular and Cellular Proteomics,
13 (5),
1219-1230.
*
Artículo
122 - Navone,L., Casati,P., Licona-Cassani,C., Marcellin,E., Nielsen,L.K., Rodriguez,E., Gramajo,H.. Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.
Applied Microbiology and Biotechnology,
98 (1),
351-360.
*
Artículo
123 - Marcellin,E., Licona-Cassani,C., Mercer,T.R., Palfreyman,R.W., Nielsen,L.K.. Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.
BMC Genomics,
14 (1).
*
Artículo
124 - Marcellin,E., Mercer,T.R., Licona-Cassani,C., Palfreyman,R.W., Dinger,M.E., Steen,J.A., Mattick,J.S., Nielsen,L.K.. Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.
BMC Genomics,
14 (1).
*
Artículo
125 - Licona-Cassani,C., Marcellin,E., Quek,L.E., Jacob,S., Nielsen,L.K.. Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.
Antonie Van Leeuwenhoek,
102 (3),
493-502.
*
Artículo
126 - Utrilla,J., Licona-Cassani,C., Marcellin,E., Gosset,G., Nielsen,L.K., Martinez,A.. Engineering and adaptive evolution of Escherichia coli for d-lactate fermentation reveals GatC as a xylose transporter.
Metabolic Engineering,
14 (5),
469-476.